Update InnoDB to 5.6.14
Apply MySQL-5.6 hack for MySQL Bug#16434374
Move Aria-only HA_RTREE_INDEX from my_base.h to maria_def.h (breaks an assert in InnoDB)
Fix InnoDB memory leak
After a clean shutdown, InnoDB will not check the *.ibd file headers,
for maximum performance. This is unchanged before and after this
patch.
What this fix addresses is the case when crash recovery is
needed. Previously, InnoDB could load a corrupted tablespace file.
buf_page_is_corrupted(): Add the parameter check_lsn.
fil_check_first_page(): New function, to perform a consistency check
on the first page of a file. This can be overridden by setting
innodb_force_recovery.
fil_read_first_page(), fil_open_single_table_tablespace(),
fil_load_single_table_tablespace(): Invoke fil_check_first_page().
open_or_create_data_files(): Check the status of
fil_open_single_table_tablespace().
rb#2352 approved by Jimmy Yang
I/O IS ASYNC
rb://1934
approved by: Mikael Ronstrom (over email)
When submitting AIO read request don't signal that the thread is
about to wait on DISKIO
Backporting the WL#5716, "Information schema table for InnoDB
buffer pool information". Backporting revisions 2876.244.113,
2876.244.102 from mysql-trunk.
rb://1177 approved by Jimmy Yang.
Changes in the InnoDB codebase required to compile and
integrate the MEB codebase with MySQL 5.5.
@ storage/innobase/btr/btr0btr.c
Excluded buffer pool usage from MEB build.
buf_pool_from_bpage calls are in buf0buf.ic, and
the buffer pool functions from that file are
disabled in MEB.
@ storage/innobase/buf/buf0buf.c
Disabling more buffer pool functions unused in MEB.
@ storage/innobase/dict/dict0dict.c
Disabling dict_ind_free that is unused in MEB.
@ storage/innobase/dict/dict0mem.c
The include
#include "ha_prototypes.h"
Was causing conflicts with definitions in my_global.h
Linking C executable mysqlbackup
libinnodb.a(dict0mem.c.o): In function `dict_mem_foreign_table_name_lookup_set':
dict0mem.c:(.text+0x91c): undefined reference to `innobase_get_lower_case_table_names'
libinnodb.a(dict0mem.c.o): In function `dict_mem_referenced_table_name_lookup_set':
dict0mem.c:(.text+0x9fc): undefined reference to `innobase_get_lower_case_table_names'
libinnodb.a(dict0mem.c.o): In function `dict_mem_foreign_table_name_lookup_set':
dict0mem.c:(.text+0x96e): undefined reference to `innobase_casedn_str'
libinnodb.a(dict0mem.c.o): In function `dict_mem_referenced_table_name_lookup_set':
dict0mem.c:(.text+0xa4e): undefined reference to `innobase_casedn_str'
collect2: ld returned 1 exit status
make[2]: *** [mysqlbackup] Error 1
innobase_get_lower_case_table_names
innobase_casedn_str
are functions that are part of ha_innodb.cc that is not part of the build
dict_mem_foreign_table_name_lookup_set
function is not there in the current codebase, meaning we do not use it in MEB.
@ storage/innobase/fil/fil0fil.c
The srv_fast_shutdown variable is declared in
srv0srv.c that is not compiled in the
mysqlbackup codebase.
This throws an undeclared error.
From the Manual
---------------
innodb_fast_shutdown
--------------------
The InnoDB shutdown mode. The default value is 1
as of MySQL 3.23.50, which causes a “fast� shutdown
(the normal type of shutdown). If the value is 0,
InnoDB does a full purge and an insert buffer merge
before a shutdown. These operations can take minutes,
or even hours in extreme cases. If the value is 1,
InnoDB skips these operations at shutdown.
This ideally does not matter from mysqlbackup
@ storage/innobase/ha/ha0ha.c
In file included from /home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/ha/ha0ha.c:34:0:
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/include/btr0sea.h:286:17: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘*’ token
make[2]: *** [CMakeFiles/innodb.dir/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/ha/ha0ha.c.o] Error 1
make[1]: *** [CMakeFiles/innodb.dir/all] Error 2
make: *** [all] Error 2
# include "sync0rw.h" is excluded from hotbackup compilation in dict0dict.h
This causes extern rw_lock_t* btr_search_latch_temp; to throw a failure because
the definition of rw_lock_t is not found.
@ storage/innobase/include/buf0buf.h
Excluding buffer pool functions that are unused from the
MEB codebase.
@ storage/innobase/include/buf0buf.ic
replicated the exclusion of
#include "buf0flu.h"
#include "buf0lru.h"
#include "buf0rea.h"
by looking at the current codebase in <meb-trunk>/src/innodb
@ storage/innobase/include/dict0dict.h
dict_table_x_lock_indexes, dict_table_x_unlock_indexes, dict_table_is_corrupted,
dict_index_is_corrupted, buf_block_buf_fix_inc_func are unused in MEB and was
leading to compilation errors and hence excluded.
@ storage/innobase/include/dict0dict.ic
dict_table_x_lock_indexes, dict_table_x_unlock_indexes, dict_table_is_corrupted,
dict_index_is_corrupted, buf_block_buf_fix_inc_func are unused in MEB and was
leading to compilation errors and hence excluded.
@ storage/innobase/include/log0log.h
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/include/log0log.h: At top level:
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/include/log0log.h:767:2: error: expected specifier-qualifier-list before â⠂¬Ëœmutex_t’
mutex_t definitions were excluded as seen from ambient code
hence excluding definition for log_flush_order_mutex also.
@ storage/innobase/include/os0file.h
Bug in InnoDB code, create_mode should have been create.
@ storage/innobase/include/srv0srv.h
In file included from /home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/buf/buf0buf.c:50:0:
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/include/srv0srv.h: At top level:
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/include/srv0srv.h:120:16: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘srv_use_native_aio’
srv_use_native_aio - we do not use native aio of the OS anyway from MEB. MEB does not compile
InnoDB with this option. Hence disabling it.
@ storage/innobase/include/trx0sys.h
[ 56%] Building C object CMakeFiles/innodb.dir/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/trx/trx0sys.c.o
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/trx/trx0sys.c: In function ‘trx_sys_read_file_format_id’:
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/trx/trx0sys.c:1499:20: error: ‘TRX_SYS_FILE_FORMAT_TAG_MAGIC_N’ undeclared (first use in this function)
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/trx/trx0sys.c:1499:20: note: each undeclared identifier is reported only once for each function it appears in
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/trx/trx0sys.c: At top level:
/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/include/buf0buf.h:607:1: warning: ‘buf_block_buf_fix_inc_func’ declared ‘static’ but never defined
make[2]: *** [CMakeFiles/innodb.dir/home/narayanan/mysql-server/mysql-5.5-meb-rel3.8-innodb-integration-1/storage/innobase/trx/trx0sys.c.o] Error 1
unused calls excluded to enable compilation
@ storage/innobase/mem/mem0dbg.c
excluding #include "ha_prototypes.h" that lead to definitions in ha_innodb.cc
@ storage/innobase/os/os0file.c
InnoDB not compiled with aio support from MEB anyway. Hence excluding this from
the compilation.
@ storage/innobase/page/page0zip.c
page0zip.c:(.text+0x4e9e): undefined reference to `buf_pool_from_block'
collect2: ld returned 1 exit status
buf_pool_from_block defined in buf0buf.ic, most of the file is excluded for compilation of MEB
@ storage/innobase/ut/ut0dbg.c
excluding #include "ha_prototypes.h" since it leads to definitions in ha_innodb.cc
innobase_basename(file) is defined in ha_innodb.cc. Hence excluding that also.
@ storage/innobase/ut/ut0ut.c
cal_tm unused from MEB, was leading to earnings, hence disabling for MEB.
rb://1043
approved by: Sunny Bains
Two internal counters were incremented twice for a single
operations. The counters are:
srv_buf_pool_flushed
buf_lru_flush_page_count
rb://942
approved by: Marko Makela
We don't need to scan LRU for dropping AHI entries when DROPing a table.
AHI entries are already removed when we free up extents for the btree.
print page dump
buf_page_print(): Remove the ut_ad(0) from the beginning. Add two flags
(enum buf_page_print_flags) that can be bitwise-ORed together:
BUF_PAGE_PRINT_NO_CRASH:
Do not crash debug builds at the end of buf_page_print().
BUF_PAGE_PRINT_NO_FULL:
Do not print the full page dump. This can be useful when adding
diagnostic printout to flushing or to the doublewrite buffer.
trx_sys_doublewrite_init_or_restore_page(): Replace exit(1) with ut_error,
so that we can get a core dump if this extraordinary condition happens.
rb:924 approved by Sunny Bains
This fix does not remove the underlying cause of the assertion
failure. It just works around the problem, allowing a corrupted
secondary index to be fixed by DROP INDEX and CREATE INDEX (or in the
worst case, by re-creating the table).
ibuf_delete(): If the record to be purged is the last one in the page
or it is not delete-marked, refuse to purge it. Instead, write an
error message to the error log and let a debug assertion fail.
ibuf_set_del_mark(): If the record to be delete-marked is not found,
display some more information in the error log and let a debug
assertion fail.
row_undo_mod_del_unmark_sec_and_undo_update(),
row_upd_sec_index_entry(): Let a debug assertion fail when the record
to be delete-marked is not found.
buf_page_print(): Add ut_ad(0) so that corruption will be more
prominent in stress testing with debug binaries. Add ut_ad(0) here and
there where corruption is noticed.
btr_corruption_report(): Display some data on page_is_comp() mismatch.
btr_assert_not_corrupted(): A wrapper around btr_corruption_report().
Assert that page_is_comp() agrees with the table flags.
rb:911 approved by Inaam Rana
InnoDB: Remove HAVE_purify, UNIV_INIT_MEM_TO_ZERO, UNIV_SET_MEM_TO_ZERO.
The compile-time setting HAVE_purify can mask potential bugs.
It is being set in PB2 Valgrind runs. We should simply get rid of it,
and replace it with UNIV_MEM_INVALID() to declare uninitialized memory
as such in Valgrind-instrumented binaries.
os_mem_alloc_large(), ut_malloc_low(): Remove the parameter set_to_zero.
ut_malloc(): Define as a macro that invokes ut_malloc_low().
buf_pool_init(): Never initialize the buffer pool frames. All pages
must be initialized before flushing them to disk.
mem_heap_alloc(): Never initialize the allocated memory block.
os_mem_alloc_nocache(), ut_test_malloc(): Unused function, remove.
rb:813 approved by Jimmy Yang
WITH LARGE BUFFER POOL
(Note: this a backport of revno:3472 from mysql-trunk)
rb://845
approved by: Marko
When dropping a table (with an .ibd file i.e.: with
innodb_file_per_table set) we scan entire LRU to invalidate pages from
that table. This can be painful in case of large buffer pools as we hold
the buf_pool->mutex for the scan. Note that gravity of the problem does
not depend on the size of the table. Even with an empty table but a
large and filled up buffer pool we'll end up scanning a very long LRU
list.
The fix is to scan flush_list and just remove the blocks belonging to
the table from the flush_list, marking them as non-dirty. The blocks
are left in the LRU list for eventual eviction due to aging. The
flush_list is typically much smaller than the LRU list but for cases
where it is very long we have the solution of releasing the
buf_pool->mutex after scanning 1K pages.
buf_page_[set|unset]_sticky(): Use new IO-state BUF_IO_PIN to ensure
that a block stays in the flush_list and LRU list when we release
buf_pool->mutex. Previously we have been abusing BUF_IO_READ to achieve
this.
The fix of Bug#12612184 broke crash recovery. When a record that
contains off-page columns (BLOBs) is updated, we must first write redo
log about the BLOB page writes, and only after that write the redo log
about the B-tree changes. The buggy fix would log the B-tree changes
first, meaning that after recovery, we could end up having a record
that contains a null BLOB pointer.
Because we will be redo logging the writes off the off-page columns
before the B-tree changes, we must make sure that the pages chosen for
the off-page columns are free both before and after the B-tree
changes. In this way, the worst thing that can happen in crash
recovery is that the BLOBs are written to free pages, but the B-tree
changes are not applied. The BLOB pages would correctly remain free in
this case. To achieve this, we must allocate the BLOB pages in the
mini-transaction of the B-tree operation. A further quirk is that BLOB
pages are allocated from the same file segment as leaf pages. Because
of this, we must temporarily "hide" any leaf pages that were freed
during the B-tree operation by "fake allocating" them prior to writing
the BLOBs, and freeing them again before the mtr_commit() of the
B-tree operation, in btr_mark_freed_leaves().
btr_cur_mtr_commit_and_start(): Remove this faulty function that was
introduced in the Bug#12612184 fix. The problem that this function was
trying to address was that when we did mtr_commit() the BLOB writes
before the mtr_commit() of the update, the new BLOB pages could have
overwritten clustered index B-tree leaf pages that were freed during
the update. If recovery applied the redo log of the BLOB writes but
did not see the log of the record update, the index tree would be
corrupted. The correct solution is to make the freed clustered index
pages unavailable to the BLOB allocation. This function is also a
likely culprit of InnoDB hangs that were observed when testing the
Bug#12612184 fix.
btr_mark_freed_leaves(): Mark all freed clustered index leaf pages of
a mini-transaction allocated (nonfree=TRUE) before storing the BLOBs,
or freed (nonfree=FALSE) before committing the mini-transaction.
btr_freed_leaves_validate(): A debug function for checking that all
clustered index leaf pages that have been marked free in the
mini-transaction are consistent (have not been zeroed out).
btr_page_alloc_low(): Refactored from btr_page_alloc(). Return the
number of the allocated page, or FIL_NULL if out of space. Add the
parameter "mtr_t* init_mtr" for specifying the mini-transaction where
the page should be initialized, or if this is a "fake allocation"
(init_mtr=NULL) by btr_mark_freed_leaves(nonfree=TRUE).
btr_page_alloc(): Add the parameter init_mtr, allowing the page to be
initialized and X-latched in a different mini-transaction than the one
that is used for the allocation. Invoke btr_page_alloc_low(). If a
clustered index leaf page was previously freed in mtr, remove it from
the memo of previously freed pages.
btr_page_free(): Assert that the page is a B-tree page and it has been
X-latched by the mini-transaction. If the freed page was a leaf page
of a clustered index, link it by a MTR_MEMO_FREE_CLUST_LEAF marker to
the mini-transaction.
btr_store_big_rec_extern_fields_func(): Add the parameter alloc_mtr,
which is NULL (old behaviour in inserts) and the same as local_mtr in
updates. If alloc_mtr!=NULL, the BLOB pages will be allocated from it
instead of the mini-transaction that is used for writing the BLOBs.
fsp_alloc_from_free_frag(): Refactored from
fsp_alloc_free_page(). Allocate the specified page from a partially
free extent.
fseg_alloc_free_page_low(), fseg_alloc_free_page_general(): Add the
parameter "mtr_t* init_mtr" for specifying the mini-transaction where
the page should be initialized, or NULL if this is a "fake allocation"
that prevents the reuse of a previously freed B-tree page for BLOB
storage. If init_mtr==NULL, try harder to reallocate the specified page
and assert that it succeeded.
fsp_alloc_free_page(): Add the parameter "mtr_t* init_mtr" for
specifying the mini-transaction where the page should be initialized.
Do not allow init_mtr == NULL, because this function is never to be
used for "fake allocations".
mtr_t: Add the operation MTR_MEMO_FREE_CLUST_LEAF and the flag
mtr->freed_clust_leaf for quickly determining if any
MTR_MEMO_FREE_CLUST_LEAF operations have been posted.
row_ins_index_entry_low(): When columns are being made off-page in
insert-by-update, invoke btr_mark_freed_leaves(nonfree=TRUE) and pass
the mini-transaction as the alloc_mtr to
btr_store_big_rec_extern_fields(). Finally, invoke
btr_mark_freed_leaves(nonfree=FALSE) to avoid leaking pages.
row_build(): Correct a comment, and add a debug assertion that a
record that contains NULL BLOB pointers must be a fresh insert.
row_upd_clust_rec(): When columns are being moved off-page, invoke
btr_mark_freed_leaves(nonfree=TRUE) and pass the mini-transaction as
the alloc_mtr to btr_store_big_rec_extern_fields(). Finally, invoke
btr_mark_freed_leaves(nonfree=FALSE) to avoid leaking pages.
buf_reset_check_index_page_at_flush(): Remove. The function
fsp_init_file_page_low() already sets
bpage->check_index_page_at_flush=FALSE.
There is a known issue in tablespace extension. If the request to
allocate a BLOB page leads to the tablespace being extended, crash
recovery could see BLOB writes to pages that are off the tablespace
file bounds. This should trigger an assertion failure in fil_io() at
crash recovery. The safe thing would be to write redo log about the
tablespace extension to the mini-transaction of the BLOB write, not to
the mini-transaction of the record update. However, there is no redo
log record for file extension in the current redo log format.
rb:693 approved by Sunny Bains
Also addressed issues in bug #11745133, where we could mark a table
corrupted instead of crashing the server when found a corrupted buffer/page
if the table created with innodb_file_per_table on.
