With combination of --log-bin and Galera the server may crash
reporting two characteristic stacks:
/usr/sbin/mysqld(_ZN13MYSQL_BIN_LOG13mark_xid_doneEmb+0xc7)[0x7f182a8e2cb7]
/usr/sbin/mysqld(binlog_background_thread+0x2b5)[0x7f182a8e3275]
or
/usr/sbin/mysqld(_ZN13MYSQL_BIN_LOG21do_checkpoint_requestEm+0x9d)[0x7ff395b2dafd]
/usr/sbin/mysqld(_ZN13MYSQL_BIN_LOG20checkpoint_and_purgeEm+0x11)[0x7ff395b2db91]
/usr/sbin/mysqld(_ZN13MYSQL_BIN_LOG16rotate_and_purgeEb+0xc2)[0x7ff395b300b2]
The reason of the failure appears to be non-matching decrements for
`xid_count_per_binlog::xid_count`
which can occur when a transaction is executed having its connection issued
`SET @@sql_log_bin=0`. In such case the xid count is not incremented but
its decrements still runs to turn `binlog_xid_count_list` into improper state
which the following FLUSH BINARY LOGS exposes through the crash.
*Note_1*: the regression test reuses an existing galera.sql_log_bin
which does not run stably (even in its base form) by mtr with --log-bin.
*Note_2*: 10.0-galera branch is free of this issue having missed MDEV-7205
fixes.
As reported in MDEV-11969 "there's no way to ditch knowledge" about some
domain that is no longer updated on a server. Besides being of annoyance to
clutter output in DBA console stale domains can prevent the slave
to connect the master as MDEV-12012 witnesses.
What domain is obsolete must be evaluated by the user (DBA) according
to whether the domain info is still relevant and will the domain ever
receive any update.
This patch introduces a method to discard obsolete gtid domains from
the server binlog state. The removal requires no event group from such
domain present in existing binlog files though. If there are any the
containing logs must be first PURGEd in order for
FLUSH BINARY LOGS DELETE_DOMAIN_ID=(list-of-domains)
succeed. Otherwise the command returns an error.
The list of obsolete domains can be computed through
intersecting two sets - the earliest (first) binlog's Gtid_list
and the current value of @@global.gtid_binlog_state - and extracting
the domain id components from the intersection list items.
The new DELETE_DOMAIN_ID featured FLUSH continues to rotate binlog
omitting the deleted domains from the active binlog file's Gtid_list.
Notice though when the command is ineffective - that none of requested to delete
domain exists in the binlog state - rotation does not occur.
Obsolete domain deletion is not harmful for connected slaves as long
as master side binlog files *purge* is synchronized with FLUSH-DELETE_DOMAIN_ID.
The slaves must have the last event from purged files processed as usual,
in order not to bump later into requesting a gtid from a file which
was already gone.
While the command is not replicated (as ordinary FLUSH BINLOG LOGS is)
slaves, even though having extra domains, won't suffer from reconnection errors
thanks to master-slave gtid connection protocol allowing the master
to be ignorant about a gtid domain.
Should at failover such slave to be promoted into master role it may run
the ex-master's
FLUSH BINARY LOGS DELETE_DOMAIN_ID=(list-of-domains)
to clean its own binlog state.
NOTES.
suite/perfschema/r/start_server_low_digest.result
is re-recorded as consequence of internal parser codes changes.
This was done to get more information about where time is spent.
Now we can get proper timing for time spent in commit, rollback,
binlog write etc.
Following stages was added:
- Commit
- Commit_implicit
- Rollback
- Rollback implicit
- Binlog write
- Init for update
- This is used instead of "Init" for insert, update and delete.
- Staring cleanup
Following stages where changed:
- "Unlocking tables" stage reset stage to previous stage at end
- "binlog write" stage resets stage to previous stage at end
- "end" -> "end of update loop"
- "cleaning up" -> "Reset for next command"
- Added stage_searching_rows_for_update when searching for rows
to be deleted.
Other things:
- Renamed all stages to start with big letter (before there was no
consitency)
- Increased performance_schema_max_stage_classes from 150 to 160.
- Most of the test changes in performance schema comes from renaming of
stages.
- Removed duplicate output of variables and inital state in a lot of
performance schema tests.
This was done to make it easier to change a default value for a
performance variable without affecting all tests.
- Added start_server_variables.test to check configuration
- Removed some duplicate "closing tables" stages
- Updated position for "stage_init_update" and "stage_updating" for
delete, insert and update to be just before update loop (for more
exact timing).
- Don't set "Checking permissions" twice in a row.
- Remove stage_end stage from creating views (not done for create table
either).
- Updated default performance history size from 10 to 20 because of new
stages
- Ensure that ps_enabled is correct (to be used in a later patch)
- Fix win64 pointer truncation warnings
(usually coming from misusing 0x%lx and long cast in DBUG)
- Also fix printf-format warnings
Make the above mentioned warnings fatal.
- fix pthread_join on Windows to set return value.
Binlog_background_thread does not make a call to set_time(), And when
we call binlog_checkpoint_log_event->write() , we write the wrong timestamp.
In this patch we correct this by calling thd->set_time().
For running the Galera tests, the variable my_disable_leak_check
was set to true in order to avoid assertions due to memory leaks
at shutdown.
Some adjustments due to MDEV-13625 (merge InnoDB tests from MySQL 5.6)
were performed. The most notable behaviour changes from 10.0 and 10.1
are the following:
* innodb.innodb-table-online: adjustments for the DROP COLUMN
behaviour change (MDEV-11114, MDEV-13613)
* innodb.innodb-index-online-fk: the removal of a (1,NULL) record
from the result; originally removed in MySQL 5.7 in the
Oracle Bug #16244691 fix
377774689b
* innodb.create-index-debug: disabled due to MDEV-13680
(the MySQL Bug #77497 fix was not merged from 5.6 to 5.7.10)
* innodb.innodb-alter-autoinc: MariaDB 10.2 behaves like MySQL 5.6/5.7,
while MariaDB 10.0 and 10.1 assign different values when
auto_increment_increment or auto_increment_offset are used.
Also MySQL 5.6/5.7 exhibit different behaviour between
LGORITHM=INPLACE and ALGORITHM=COPY, so something needs to be tested
and fixed in both MariaDB 10.0 and 10.2.
* innodb.innodb-wl5980-alter: disabled because it would trigger an
InnoDB assertion failure (MDEV-13668 may need additional effort in 10.2)
Assertions failed due to incorrect handling of the --tc-heuristic-recover
option when InnoDB is in read-only mode either due to innodb_read_only=1
or innodb_force_recovery>3. InnoDB failed to refuse a XA COMMIT or
XA ROLLBACK operation, and there were errors in the error handling in
the upper layer.
This was fixed by making InnoDB XA operations respect the
high_level_read_only flag. The InnoDB part of the fix and
parts of the test main.tc_heuristic_recover were provided
by Marko Mäkelä.
LOCK_log mutex lock/unlock had to be added to fix MDEV-13438.
The measure is confirmed by mysql sources as well.
For testing of the conflicting option combination, mysql-test-run is
made to export a new $MYSQLD_LAST_CMD. It holds the very last value
generated by mtr.mysqld_start(). Even though the options have been
also always stored in $mysqld->{'started_opts'} there were no access
to them beyond the automatic server restart by mtr through the expect
file interface.
Effectively therefore $MYSQLD_LAST_CMD represents a more general
interface to $mysqld->{'started_opts'} which can be used in wider
scopes including server launch with incompatible options.
Notice another existing method to restart the server with incompatible
options relying on $MYSQLD_CMD is is aware of $mysqld->{'started_opts'}
(the actual options that the server is launched by mtr). In order to use
this method they would have to be provided manually.
NOTE: When merging to 10.2, the file search_pattern_in_file++.inc
should be replaced with the pre-existing search_pattern_in_file.inc.
This fixes MDEV-7742 and MDEV-8305 (Allow user to specify if stored
procedures should be logged in the slow and general log)
New functionality:
- Added new variables log_slow_disable_statements and log_disable_statements
that can be used to disable logging of certain queries to slow and
general log. Currently supported options are 'admin', 'call', 'slave'
and 'sp'.
Defaults are as before. Only 'sp' (stored procedure statements) is
disabled for slow and general_log.
- Slow log to files now includes the following new information:
- When logging stored procedure statements the name of stored
procedure is logged.
- Number of created tmp_tables, tmp_disk_tables and the space used
by temporary tables.
- When logging 'call', the logged status now contains the sum of all
included statements. Before only 'time' was correct.
- Added filsort_priority_queue as an option for log_slow_filter (this
variable existed before, but was not exposed)
- Added support for BIT types in my_getopt()
Mapped some old variables to bitmaps (old variables can still be used)
- Variable 'log_queries_not_using_indexes' is mapped to
log_slow_filter='not_using_index'
- Variable 'log_slow_slave_statements' is mapped to
log_slow_disabled_statements='slave'
- Variable 'log_slow_admin_statements' is mapped to
log_slow_disabled_statements='admin'
- All the above variables are changed to session variables from global
variables
Other things:
- Simplified LOGGER::log_command. We don't need to check for super if
OPTION_LOG_OFF is set as this flag can only be set if one is a super
user.
- Removed some setting of enable_slow_log as it's guaranteed to be set by
mysql_parse()
- mysql_admin_table() now sets thd->enable_slow_log
- Added prepare_logs_for_admin_command() to reset thd->enable_slow_log if
needed.
- Added new functions to store, restore and add slow query status
- Added new functions to store and restore query start time
- Reorganized Sub_statement_state according to types
- Added code in dispatch_command() to ensure that
thd->reset_for_next_command() is always called for a query.
- Added thd->last_sql_command to simplify checking of what was the type
of the last command. Needed when logging to slow log as lex->sql_command
may have changed before slow logging is called.
- Moved QPLAN_TMP_... to where status for tmp tables are updated
- Added new THD variable, affected_rows, to be able to correctly log
number of affected rows to slow log.
- Simplified use_trans_cache() to return at once if is_transactional is set
- Indentation and spelling errors fixed
- Don't call signal_update() if update_binlog_end_pos() is called as the
function already calls signal_update()
- Removed not used function wait_for_update_bin_log(), which would cause
errors if ever used.
- Simplified handler::clone() by always allocating 'ref' in ha_open(). To do
this I added an optional MEM_ROOT argument to ha_open() to be used when
allocating 'ref'
- Changed arguments to get_system_var() from LEX_CSTRING to LEX_CSTRING*
- Added THD as argument to create_select_for_variable(). Changed also char*
argument to LEX_CSTRING to avoid strlen() call.
- Change calls to append() to use LEX_CSTRING
- Now we have same thread_id in general log, slow long and error log
instead of a long meaningless thread number that may even change for
one user.
- Align error and slow log header with output
- Extend thread_id with one number to handle nice printing up to ten
million connections
- Added sql/mariadb.h file that should be included first by files in sql
directory, if sql_plugin.h is not used (sql_plugin.h adds SHOW variables
that must be done before my_global.h is included)
- Removed a lot of include my_global.h from include files
- Removed include's of some files that my_global.h automatically includes
- Removed duplicated include's of my_sys.h
- Replaced include my_config.h with my_global.h
Problem:-
This crash happens because logged stmt is quite big and while writing
Annotate_rows_log_event it throws EFBIG error but we ignore this error
and do not call cache_data->set_incident().
Solution:-
When we normally write Binlog_log_event we check for error EFBIG, but we did
do this for Annotate_rows_log_event. We check for this error and call
cache_data->set_incident() accordingly.
# Conflicts:
# sql/log.cc
Do not silence uncertain cases, or fix any bugs.
The only functional change should be that ha_federated::extra()
is not calling DBUG_PRINT to report an unhandled case for
HA_EXTRA_PREPARE_FOR_DROP.
Do not silence uncertain cases, or fix any bugs.
The only functional change should be that ha_federated::extra()
is not calling DBUG_PRINT to report an unhandled case for
HA_EXTRA_PREPARE_FOR_DROP.
Binlog_background_thread does not make a call to set_time(), And when
we call binlog_checkpoint_log_event->write() , we write the wrong timestamp.
In this patch we correct this by calling thd->set_time().
Benefits of this patch:
- Removed a lot of calls to strlen(), especially for field_string
- Strings generated by parser are now const strings, less chance of
accidently changing a string
- Removed a lot of calls with LEX_STRING as parameter (changed to pointer)
- More uniform code
- Item::name_length was not kept up to date. Now fixed
- Several bugs found and fixed (Access to null pointers,
access of freed memory, wrong arguments to printf like functions)
- Removed a lot of casts from (const char*) to (char*)
Changes:
- This caused some ABI changes
- lex_string_set now uses LEX_CSTRING
- Some fucntions are now taking const char* instead of char*
- Create_field::change and after changed to LEX_CSTRING
- handler::connect_string, comment and engine_name() changed to LEX_CSTRING
- Checked printf() related calls to find bugs. Found and fixed several
errors in old code.
- A lot of changes from LEX_STRING to LEX_CSTRING, especially related to
parsing and events.
- Some changes from LEX_STRING and LEX_STRING & to LEX_CSTRING*
- Some changes for char* to const char*
- Added printf argument checking for my_snprintf()
- Introduced null_clex_str, star_clex_string, temp_lex_str to simplify
code
- Added item_empty_name and item_used_name to be able to distingush between
items that was given an empty name and items that was not given a name
This is used in sql_yacc.yy to know when to give an item a name.
- select table_name."*' is not anymore same as table_name.*
- removed not used function Item::rename()
- Added comparision of item->name_length before some calls to
my_strcasecmp() to speed up comparison
- Moved Item_sp_variable::make_field() from item.h to item.cc
- Some minimal code changes to avoid copying to const char *
- Fixed wrong error message in wsrep_mysql_parse()
- Fixed wrong code in find_field_in_natural_join() where real_item() was
set when it shouldn't
- ER_ERROR_ON_RENAME was used with extra arguments.
- Removed some (wrong) ER_OUTOFMEMORY, as alloc_root will already
give the error.
TODO:
- Check possible unsafe casts in plugin/auth_examples/qa_auth_interface.c
- Change code to not modify LEX_CSTRING for database name
(as part of lower_case_table_names)
This happens because the master writes a table_map event to the binary log, but no row event.
The slave has a check that there should always be a row event if there was a table_map event, which
causes a crash.
Fixed by remembering in the cache what kind of events are logged
and ignore cached statements which is just a table map event.
Define my_thread_id as an unsigned type, to avoid mismatch with
ulonglong. Change some parameters to this type.
Use size_t in a few more places.
Declare many flag constants as unsigned to avoid sign mismatch
when shifting bits or applying the unary ~ operator.
When applying the unary ~ operator to enum constants, explictly
cast the result to an unsigned type, because enum constants can
be treated as signed.
In InnoDB, change the source code line number parameters from
ulint to unsigned type. Also, make some InnoDB functions return
a narrower type (unsigned or uint32_t instead of ulint;
bool instead of ibool).
Protection added to reopen_file() and new_file_impl().
Without this we could get an assert in fn_format() as name == 0,
because the file was closed and name reset, atthe same time
new_file_impl() was called.
- Changed error handlers interface so that they can change error level in
the handler
- Give warnings and errors when calculating virtual columns
- On insert/update error is fatal in strict mode.
- SELECT and DELETE will only give a warning if a virtual field generates an error
- Added VCOL_UPDATE_FOR_DELETE and VCOL_UPDATE_INDEX_FOR_REPLACE to be able to
easily detect in update_virtual_fields() if we should use an error
handler to mask errors or not.
Add some event types for the compressed event, there are:
QUERY_COMPRESSED_EVENT,
WRITE_ROWS_COMPRESSED_EVENT_V1,
UPDATE_ROWS_COMPRESSED_EVENT_V1,
DELETE_POWS_COMPRESSED_EVENT_V1,
WRITE_ROWS_COMPRESSED_EVENT,
UPDATE_ROWS_COMPRESSED_EVENT,
DELETE_POWS_COMPRESSED_EVENT.
These events inheritance the uncompressed editor events. One of their constructor functions and write
function have been overridden for uncompressing and compressing. Anything but this is totally the same.
On slave, The IO thread will uncompress and convert them When it receiving the events from the master.
So the SQL and worker threads can be stay unchanged.
Now we use zlib as compress algorithm. It maybe support other algorithm in the future.
Merge feature into 10.2 from feature branch.
Delayed replication adds an option
CHANGE MASTER TO master_delay=<seconds>
Replication will then delay applying events with that many
seconds. This creates a replication slave that reflects the state of
the master some time in the past.
Feature is ported from MySQL source tree.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>
The original MySQL patch left some refactoring todo's, possibly
because of known conflicts with other parallel development (like
info-repository feature perhaps).
This patch fixes those todos/refactorings.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>
Initial merge of delayed replication from MySQL git.
The code from the initial push into MySQL is merged, and the
associated test case passes. A number of tasks are still pending:
1. Check full test suite run for any regressions or .result file updates.
2. Extend the feature to also work for parallel replication.
3. There are some todo-comments about future refactoring left from
MySQL, these should be located and merged on top.
4. There are some later related MySQL commits, these should be checked
and merged. These include:
e134b9362ba0b750d6ac1b444780019622d14aa5
b38f0f7857c073edfcc0a64675b7f7ede04be00f
fd2b210383358fe7697f201e19ac9779879ba72a
afc397376ec50e96b2918ee64e48baf4dda0d37d
5. The testcase from MySQL relies heavily on sleep and timing for
testing, and seems likely to sporadically fail on heavily loaded test
servers in buildbot or distro build farms.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>
.. file '/var/log/mysql/mariadb-bin.000001' not found in binlog
index, needed for recovery. Aborting.
In Galera cluster, while preparing for rsync/xtrabackup based
SST, the donor node takes an FTWRL followed by (REFRESH_ENGINE_LOG
in rsync based state transfer and) REFRESH_BINARY_LOG. The latter
rotates the binary log and logs Binlog_checkpoint_log_event
corresponding to the penultimate binary log file into the new file.
The checkpoint event for the current file is later logged
synchronously by binlog_background_thread.
Now, since in rsync/xtrabackup based snapshot state transfer methods,
only the last binary log file is transferred to the joiner node; the
file could get transferred even before the checkpoint event for the
same file gets written to it. As a result, the joiner node would fail
to start complaining about the missing binlog file needed for recovery.
In order to fix this, a mechanism has been put in place to make
REFRESH_BINARY_LOG operation wait for Binlog_checkpoint_log_event
to be logged for the current binary log file if the node is part of
a Galera cluster. As further safety, during rsync based state transfer
the donor node now acquires and owns LOCK_log for the duration of file
transfer during SST.
In the AFTER_SYNC case, semi-sync was taking the binlog file name from
the wrong place, so around binlog rotation it could be using the new
name with a position belonging to the previous binlog file name.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>
.. file '/var/log/mysql/mariadb-bin.000001' not found in binlog
index, needed for recovery. Aborting.
In Galera cluster, while preparing for rsync/xtrabackup based
SST, the donor node takes an FTWRL followed by (REFRESH_ENGINE_LOG
in rsync based state transfer and) REFRESH_BINARY_LOG. The latter
rotates the binary log and logs Binlog_checkpoint_log_event
corresponding to the penultimate binary log file into the new file.
The checkpoint event for the current file is later logged
synchronously by binlog_background_thread.
Now, since in rsync/xtrabackup based snapshot state transfer methods,
only the last binary log file is transferred to the joiner node; the
file could get transferred even before the checkpoint event for the
same file gets written to it. As a result, the joiner node would fail
to start complaining about the missing binlog file needed for recovery.
In order to fix this, a mechanism has been put in place to make
REFRESH_BINARY_LOG operation wait for Binlog_checkpoint_log_event
to be logged for the current binary log file if the node is part of
a Galera cluster. As further safety, during rsync based state transfer
the donor node now acquires and owns LOCK_log for the duration of file
transfer during SST.
- To ensure that mallocs are marked for the correct THD, even if it's
allocated in another thread, I added the thread_id to the THD constructor
- Added st_my_thread_var to thr_lock_info_init() to avoid a call to my_thread_var
- Moved things from THD::THD() to THD::init()
- Moved some things to THD::cleanup()
- Added THD::free_connection() and THD::reset_for_reuse()
- Added THD to CONNECT::create_thd()
- Added THD::thread_dbug_id and st_my_thread_var->dbug_id. These are needed
to ensure that we have a constant thread_id used for debugging with a THD,
even if it changes thread_id (=connection_id)
- Set variables.pseudo_thread_id in constructor. Removed not needed sets.
Revert following bug fix:
Bug#20685029: SLAVE IO THREAD SHOULD STOP WHEN DISK IS
FULL
Bug#21753696: MAKE SHOW SLAVE STATUS NON BLOCKING IF IO
THREAD WAITS FOR DISK SPACE
This fix results in a deadlock between slave IO thread
and SQL thread.
(cherry picked from commit e3fea6c6dbb36c6ab21c4ab777224560e9608b53)
- Change some static variables to dynamic to ensure that we don't do any memory
allocations before server starts or stops
- Print more memory information on SIGHUP. Fixed output.
- Write out if memory was lost if run with --debug-at-exit
- Fixed wrong #ifdef in sql_cache.cc
FAILURES
Analysis:
=========
Test script is not ensuring that "assert_grep.inc" should be
called only after 'Disk is full' error is written to the
error log.
Test checks for "Queueing master event to the relay log"
state. But this state is set before invoking 'queue_event'.
Actual 'Disk is full' error happens at a very lower level.
It can happen that we might even reset the debug point
before even the actual disk full simulation occurs and the
"Disk is full" message will never appear in the error log.
In order to guarentee that we must have some mechanism where
in after we write "Disk is full" error messge into the error
log we must signal the test to execute SSS and then reset
the debug point. So that test is deterministic.
Fix:
===
Added debug sync point to make script deterministic.
FULL
Bug#21753696: MAKE SHOW SLAVE STATUS NON BLOCKING IF IO
THREAD WAITS FOR DISK SPACE
Problem:
========
Currently SHOW SLAVE STATUS blocks if IO thread waits for
disk space. This makes automation tools verifying
server health block on taking relevant action. Finally this
will create SHOW SLAVE STATUS piles.
Analysis:
=========
SHOW SLAVE STATUS hangs on mi->data_lock if relay log write
is waiting for free disk space while holding mi->data_lock.
mi->data_lock is needed to protect the format description
event (mi->format_description_event) which is accessed by
the clients running FLUSH LOGS and slave IO thread. Note
relay log writes don't need to be protected by
mi->data_lock, LOCK_log is used to protect relay log between
IO and SQL thread (see MYSQL_BIN_LOG::append_event). The
code takes mi->data_lock to protect
mi->format_description_event during relay log rotate which
might get triggered right after relay log write.
Fix:
====
Release the data_lock just for the duration of writing into
relay log.
Made change to ensure the following lock order is maintained
to avoid deadlocks.
data_lock, LOCK_log
data_lock is held during relay log rotations to protect
the description event.
Limit binlog recovery so that the wsrep position found from
storage engines is not exceeded. This is required to have consistent
position between wsrep position stored in innodb header and
recoverd binlog.
Creating a CONNECT object on client connect and pass this to the working thread which creates the THD.
Split LOCK_thread_count to different mutexes
Added LOCK_thread_start to syncronize threads
Moved most usage of LOCK_thread_count to dedicated functions
Use next_thread_id() instead of thread_id++
Other things:
- Thread id now starts from 1 instead of 2
- Added cast for thread_id as thread id is now of type my_thread_id
- Made THD->host const (To ensure it's not changed)
- Removed some DBUG_PRINT() about entering/exiting mutex as these was already logged by mutex code
- Fixed that aborted_connects and connection_errors_internal are counted in all cases
- Don't take locks for current_linfo when we set it (not needed as it was 0 before)
Relax the number-of-XA-engines check on recovery. Allow *more*
engines to be present than absolutely necessary, extra engines
cannot affect ACID guarantees of the recovery process.
As a bonus, 10.0->crash->10.1 upgrade won't complain about
wsrep being a new XA storge engine.
Problem:
=======
rpl_binlog_index.test fails with following valgrind error.
line
Conditional jump or move depends on uninitialised value(s)
at 0x4C2F842: __memcmp_sse4_1 (in /usr/lib64/valgrind/
vgpreload_memcheck-amd64-linux.so)
0x739E39: find_uniq_filename(char*) (log.cc:2212)
0x73A11B: MYSQL_LOG::generate_new_name(char*, char const*)
(log.cc:2492)
0x73A1ED: MYSQL_LOG::init_and_set_log_file_name(char const*,
char const*, enum_log_type, cache_type) (log.cc:2289)
0x73B6F5: MYSQL_BIN_LOG::open(char const*, enum_log_type,
Analysis and fix:
=================
This issue was fixed as part of Bug#20459363 fix in 5.6 and
above. Hence backporting the fix to MySQL-5.5.
- Added --start option to mysqld which don't prints notes to log on startup
This helps to find errors in configure options easier
- Dont write [Note] entries to log after we have abort the server
This makes it easier to find what went wrong
- Don't by default write out Changed limits for max_open_files as this didn't really change from anything the user gave us
- Dont write warnings about not using --explicit_defaults_for_timestamp (we don't have plans do depricate the old behaviour)
Clear binlog table maps before writing SAVEPOINT query event into
binlog cache. This enforces recreation of table map events for the
following row event.
--encrypt-binlog and --encrypt-tmp-files used to mean
"encrypt XXX if encryption is available, otherwise don't encrypt",
now they mean "encrypt or fail with an error".
Introduce Log_event_writer() that encapsulates
writing data to an IO_CACHE with automatic checksum calculation.
Now all events properly checksum themselves as needed.
Use Log_event_writer in MYSQL_BIN_LOG::write_cache() instead
of copy-pasting its logic all over.
Later Log_event_writer will also do encryption.
If a transaction T1 needs to wait for a transaction T2, T2's commit will
skip the normal binlog_commit_wait_usec delay, in order not to needlessly
stall throughput.
This works by checking if T2 is already ready to commit. If so, it is woken
up. If not, we set a flag in T2 so that when it gets ready to commit, it
will do so immediately.
But there was a potential race due to insufficient locking, if T2 gets ready
to commit just at the point where T1 does the check. If the race hits, the
wakeup (and early commit) of T2 might be lost.
The race is only theoretical (from code inspection, no known test case), but
seems best to fix it anyway, by properly locking LOCK_prepare_ordered around
the check.
While sql_bin_log=1(0) is meant to control binary logging for the
current session so that the updates to do(not) get logged into the
binary log to be replicated to the async MariaDB slave. The same
should not affect galera replication.
That is, the updates should always get replicated to other galera
nodes regardless of sql_bin_log's value.
Fixed by making sure that the updates are written to binlog cache
irrespective of sql_bin_log.
Added test cases.
Fix was to add a test in Query_log_event::Query_log_event() if we are using
CREATE ... SELECT and in this case use trans cache, like we do on the master.
This avoid using (with doesn't have checksum)
Other things:
- Removed dummy call my_checksum(0L, NULL, 0)
- More DBUG_PRINT
- Cleaned up Log_event::need_checksum() to make it more readable (similar as in MySQL 5.6)
- Renamed variable that was hiding another one in create_table_imp()
field.cc
- Fixed warning about overlapping memory copy (backport from 10.0)
Item_subselect.cc
- Fixed core dump in main.view
- Problem was that thd->lex->current_select->master_unit()->item was not set, which caused crash in maxr_as_dependent
sql/mysqld.cc
- Got error on shutdown as we where freeing mutex before all THD objects was freed
(~THD uses some mutex). Fixed by during shutdown freeing THD inside mutex.
sql/log.cc
- log_space_lock and LOCK_log where locked in inconsistenly. Fixed by not having a log_space_lock around purge_logs.
sql/slave.cc
- Remove unnecessary log_space_lock
- Move cond_broadcast inside lock to ensure we don't miss the signal
Other things:
- Avoid calling init_and_set_log_file_name() when opening binary log.
- Remove newlines early when reading from index file.
- Ensure that reset_logs() will work even if thd is 0 (Can happen on startup)
- Added thd to sart_slave_threads() for better error handling.
- Changed ER(ER_...) to ER_THD(thd, ER_...) when thd was known or if there was many calls to current_thd in the same function.
- Changed ER(ER_..) to ER_THD_OR_DEFAULT(current_thd, ER...) in some places where current_thd is not necessary defined.
- Removing calls to current_thd when we have access to thd
Part of this is optimization (not calling current_thd when not needed),
but part is bug fixing for error condition when current_thd is not defined
(For example on startup and end of mysqld)
Notable renames done as otherwise a lot of functions would have to be changed:
- In JOIN structure renamed:
examined_rows -> join_examined_rows
record_count -> join_record_count
- In Field, renamed new_field() to make_new_field()
Other things:
- Added DBUG_ASSERT(thd == tmp_thd) in Item_singlerow_subselect() just to be safe.
- Removed old 'tab' prefix in JOIN_TAB::save_explain_data() and use members directly
- Added 'thd' as argument to a few functions to avoid calling current_thd.
Add log_bin_index, log_bin_basename and relay_log_basename system
variables. Also, convert relay_log_index system variable to
NO_CMD_LINE and implement --relay-log-index as a command line
option.
Remove the too restrictive bugfix for bug#67088.
FIFO can be used for general/slow logs, but lseek() and fsync() on
FIFO fail. And open() needs to be non-blocking, in case the other
end isn't reading.
This bug is a side-effect of fix for MDEV-6924, where we completely
stopped a statement-based event from getting into the binlog cache when
binary logging is not enabled (and thus, wsrep_emulate_binlog mode = 1).
As a result, the SBR events were not replicated.
Fixed by allowing the SBR events to be written into the binlog cache.
Note: Only DMLs were affected as DDLs are replicated via TOI.
Merged galera_create_trigger.test from github.com/codership/mysql-wsrep.
The hangs occur when the group_commit_orderer object is freed before the last
mark_start_commit() call on it - this loses the wakeup to other waiting worker
threads, causing them to hang until killed manually.
The object was freed because wakeup_subsequent_commits() was called two early
in two places. For MDEV-7888, during ANALYZE TABLE, and for MDEV-7929 during
record_gtid() after processing a DDL event. The group_commit_orderer object
can be freed when its last transaction has called wait_for_prior_commit().
Fix by implementing a suspend/resume mechanism for wakeup_subsequent_commits()
that can be used in places where a transaction is committed without this being
the commit of the actual replication event group.
Also add a protection mechanism (that asserts in debug builds) which can
prevent the too-early free and hang if other similar bugs should remain in
other parts of the code.
remove group_commit_reason_immediate
rename group_commit_reason_transaction to group_commit_trigger_lock_wait
rename group_commit_reason_usec to group_commit_trigger_timeout
rename group_commit_reason_count to group_commit_triggger_count
This patch fixes a bug in the error handling in parallel replication, when one
worker thread gets a failure and other worker threads processing later
transactions have to rollback and abort.
The problem was with the lifetime of group_commit_orderer objects (GCOs).
A GCO is freed when we register that its last event group has committed. This
relies on register_wait_for_prior_commit() and wait_for_prior_commit() to
ensure that the fact that T2 has committed implies that any earlier T1 has
also committed, and can thus no longer execute mark_start_commit().
However, in the error case, the code was skipping the
register_wait_for_prior_commit() and wait_for_prior_commit() calls. Thus
commit ordering was not guaranteed, and a GCO could be freed too early. Then a
later mark_start_commit() would reference deallocated GCO, which could lead to
lost wakeup (causing slave threads to hang) or other corruption.
This patch makes also the error case respect commit order. This way, also the
error case gets the GCO lifetime correct, and the hang no longer occurs.
The following global status variables where added:
* binlog_group_commit_reason_count
* binlog_group_commit_reason_usec
* binlog_group_commit_reason_transaction
* binlog_group_commit_reason_immediate
binlog_group_commit_reason_count corresponds to group commits made by
virtue of the binlog_commit_wait_count variable.
binlog_group_commit_reason_usec corresponds to the binlog_commit_wait_usec
variable.
binlog_group_commit_reason_transaction is a result of ordered
transaction that need to occur in the same order on the slave and can't
be parallelised.
binlog_group_commit_reason_immediate is caused to prevent stalls with
row locks as described in log.cc:binlog_report_wait_for. This immediate
count is also counted a second time in binlog_group_commit_reason_transaction.
Overall binlog_group_commits = binlog_group_commit_reason_count +
binlog_group_commit_reason_usec + binlog_group_commit_reason_transaction
This work was funded thanks to Open Source Developers Club Australia.
Parallel replication (in 10.0 / "conservative" mode) relies on binlog group
commits to group transactions that can be safely run in parallel on the
slave. The --binlog-commit-wait-count and --binlog-commit-wait-usec options
exist to increase the number of commits per group. But in case of conflicts
between transactions, this can cause unnecessary delay and reduced througput,
especially on a slave where commit order is fixed.
This patch adds a heuristics to reduce this problem. When transaction T1 goes
to commit, it will first wait for N transactions to queue up for a group
commit. However, if we detect that another transaction T2 is waiting for a row
lock held by T1, then we will skip the wait and let T1 commit immediately,
releasing locks and let T2 continue.
On a slave, this avoids the unfortunate situation where T1 is waiting for T2
to join the group commit, but T2 is waiting for T1 to release locks, causing
no work to be done for the duration of the --binlog-commit-wait-usec timeout.
(The heuristic seems reasonable on the master as well, so it is enabled for
all transactions, not just replication transactions).
log-tc-size is 24K by default. Page size is 64K on PPC64. But log-tc-
size
must be at least 3 x page size. This is enforced by TC_LOG_MMAP::open()
with a comment: to guarantee non-empty pool.
This all makes server not startable in default configuration on PPC64.
Autosize log-tc-size, so that it's min value= page size * 3, default
value= page size * 6, block size= page size.
Conflicts:
mysql-test/suite/sys_vars/inc/sysvars_server.inc
mysql-test/suite/sys_vars/r/sysvars_server_notembedded.result
mysql-test/t/mysqld--help.test
sql/mysqld.cc
sql/sys_vars.cc
The problem occurs in parallel replication in GTID mode, when we are using
multiple replication domains. In this case, if the SQL thread stops, the
slave GTID position may refer to a different point in the relay log for each
domain.
The bug was that when the SQL thread was stopped and restarted (but the IO
thread was kept running), the SQL thread would resume applying the relay log
from the point of the most advanced replication domain, silently skipping all
earlier events within other domains. This caused replication corruption.
This patch solves the problem by storing, when the SQL thread stops with
multiple parallel replication domains active, the current GTID
position. Additionally, the current position in the relay logs is moved back
to a point known to be earlier than the current position of any replication
domain. Then when the SQL thread restarts from the earlier position, GTIDs
encountered are compared against the stored GTID position. Any GTID that was
already applied before the stop is skipped to avoid duplicate apply.
This patch should have no effect if multi-domain GTID parallel replication is
not used. Similarly, if both SQL and IO thread are stopped and restarted, the
patch has no effect, as in this case the existing relay logs are removed and
re-fetched from the master at the current global @@gtid_slave_pos.
When the server starts up, check if the master-bin.state file was lost.
If it was, recover its contents by scanning the last binlog file, thus
avoiding running with a corrupt binlog state.
When the binlog was rotated due to @@max_binlog_size, the values of the
binlog_shapshot_file and binlog_snapshot_position were inconsistent in case of
non-transactional DML. The position was refering to the old file, while the
filename was of the new file after rotation. This patch makes them consistent
by making sure the position is also refering to the new file.
Using a boolean flag for 'there is a RESET MASTER in progress' doesn't
work very well for multiple concurrent RESET MASTER statements.
Changed to a counter.
The problem was caused by a merge error (incorrect conflict resolution) when
the MDEV-7257 patch was merged into 10.1.
The incorrect merge put two code blocks in the wrong order. This caused a race
that was seen as sporadic test failures.
(The problem was that binlog end position was updated before running
after_flush hook; this way it was possible for the binlog dump thread to send
a transaction to a slave without requesting semi-sync acknowledgement. Then
when no acknowledgement was received, semisync replication would be disabled
on the master.)
log-tc-size is 24K by default. Page size is 64K on PPC64. But log-tc-size
must be at least 3 x page size. This is enforced by TC_LOG_MMAP::open()
with a comment: to guarantee non-empty pool.
This all makes server not startable in default configuration on PPC64.
Autosize log-tc-size, so that it's min value= page size * 3, default
value= page size * 6, block size= page size.
Implement --semi-sync-master-wait-point=AFTER_SYNC|AFTER_COMMIT.
When AFTER_SYNC, the semi-sync wait will be done earlier, before the storage
engine commit rather than after. This means that a transaction will not be
visible on the master until at least one slave has received it.
Make the binlog dump threads not need to take LOCK_log while sending
binlog events to slave. Instead, a new LOCK_binlog_end_pos is used
just to coordinate tracking the current end-of-log.
This is a pre-requisite for MDEV-162, "Enhanced semisync
replication". It should also help reduce the contention on LOCK_log on
a busy master.
Also does some much-needed refactoring/cleanup of the related code in
the binlog dump thread.
The real problem here was inconsistent handling of entry->commit_errno in
MYSQL_BIN_LOG::write_transaction_or_stmt(). Some return paths were setting it
to the value of errno, some where not. And the setting was redundant anyway,
as it is set consistently by the caller.
Fix by consistently setting it in the caller, and not in each return path in
the function.
The test failure happened because a DBUG_EXECUTE_IF() used in the test case
set an entry->commit_errno that was immediately overwritten in the caller with
whatever happened to be the value of errno. This could lead to different error
message in the .result file.
The code in binlog group commit around wait_for_commit that controls commit
order, did the wakeup of subsequent commits early, as soon as a following
transaction is put into the group commit queue, but before any such commit has
actually taken place. This causes problems with too early wakeup of
transactions that need to wait for prior to commit, but do not take part in
the binlog group commit for one reason or the other.
This patch solves the problem, by moving the wakeup to happen only after the
binlog group commit is completed.
This requires a new solution to ensure that transactions that arrive later
than the leader are still able to participate in group commit. This patch
introduces a flag wait_for_commit::commit_started. When this is set, a waiter
can queue up itself in the group commit queue.
This way, effectively the wait_for_prior_commit() is skipped only for
transactions that participate in group commit, so that skipping the wait is
safe. Other transactions still wait as needed for correctness.
In parallel replication, the wait_for_commit facility is used to ensure that
events are written into the binlog in the correct order. This is handled in an
optimised way in the binlogging group commit code.
However, some statements, for example GRANT, are written directly into the
binlog, outside of the group commit code. There was a bug that this direct
write does not correctly wait for the prior transactions to have been written
first, which allows f.ex. GRANT to be written ahead of earlier transactions.
This patch adds the missing wait_for_prior_commit() before writing directly to
the binlog.
However, the problem is still there, although the race is much less likely to
occur now. The problem is that the optimised group commit code does wakeup of
following transactions early, before the binlog write is actually done. A
woken-up following transaction is then allowed to run ahead and queue up for
the group commit, which will ensure that binlog write happens in correct order
in the end. However, the code for directly written events currently bypass
this mechanism, so they get woken up and written too early.
This will be fixed properly in a later patch.
The reason for the failure was a bug in an include file on debian that causes 'struct stat'
to have different sized depending on the environment.
This patch fixes so that we always include my_global.h or my_config.h before we include any other files.
Other things:
- Removed #include <my_global.h> in some include files; Better to always do this at the top level to have as few
"always-include-this-file-first' files as possible.
- Removed usage of some include files that where already included by my_global.h or by other files.
client/mysql_plugin.c:
Use my_global.h first
client/mysqlslap.c:
Remove duplicated include files
extra/comp_err.c:
Remove duplicated include files
include/m_string.h:
Remove duplicated include files
include/maria.h:
Remove duplicated include files
libmysqld/emb_qcache.cc:
Use my_global.h first
plugin/semisync/semisync.h:
Use my_pthread.h first
sql/datadict.cc:
Use my_global.h first
sql/debug_sync.cc:
Use my_global.h first
sql/derror.cc:
Use my_global.h first
sql/des_key_file.cc:
Use my_global.h first
sql/discover.cc:
Use my_global.h first
sql/event_data_objects.cc:
Use my_global.h first
sql/event_db_repository.cc:
Use my_global.h first
sql/event_parse_data.cc:
Use my_global.h first
sql/event_queue.cc:
Use my_global.h first
sql/event_scheduler.cc:
Use my_global.h first
sql/events.cc:
Use my_global.h first
sql/field.cc:
Use my_global.h first
Remove duplicated include files
sql/field_conv.cc:
Use my_global.h first
sql/filesort.cc:
Use my_global.h first
Remove duplicated include files
sql/gstream.cc:
Use my_global.h first
sql/ha_ndbcluster.cc:
Use my_global.h first
sql/ha_ndbcluster_binlog.cc:
Use my_global.h first
sql/ha_ndbcluster_cond.cc:
Use my_global.h first
sql/ha_partition.cc:
Use my_global.h first
sql/handler.cc:
Use my_global.h first
sql/hash_filo.cc:
Use my_global.h first
sql/hostname.cc:
Use my_global.h first
sql/init.cc:
Use my_global.h first
sql/item.cc:
Use my_global.h first
sql/item_buff.cc:
Use my_global.h first
sql/item_cmpfunc.cc:
Use my_global.h first
sql/item_create.cc:
Use my_global.h first
sql/item_geofunc.cc:
Use my_global.h first
sql/item_inetfunc.cc:
Use my_global.h first
sql/item_row.cc:
Use my_global.h first
sql/item_strfunc.cc:
Use my_global.h first
sql/item_subselect.cc:
Use my_global.h first
sql/item_sum.cc:
Use my_global.h first
sql/item_timefunc.cc:
Use my_global.h first
sql/item_xmlfunc.cc:
Use my_global.h first
sql/key.cc:
Use my_global.h first
sql/lock.cc:
Use my_global.h first
sql/log.cc:
Use my_global.h first
sql/log_event.cc:
Use my_global.h first
sql/log_event_old.cc:
Use my_global.h first
sql/mf_iocache.cc:
Use my_global.h first
sql/mysql_install_db.cc:
Remove duplicated include files
sql/mysqld.cc:
Remove duplicated include files
sql/net_serv.cc:
Remove duplicated include files
sql/opt_range.cc:
Use my_global.h first
sql/opt_subselect.cc:
Use my_global.h first
sql/opt_sum.cc:
Use my_global.h first
sql/parse_file.cc:
Use my_global.h first
sql/partition_info.cc:
Use my_global.h first
sql/procedure.cc:
Use my_global.h first
sql/protocol.cc:
Use my_global.h first
sql/records.cc:
Use my_global.h first
sql/records.h:
Don't include my_global.h
Better to do this at the upper level
sql/repl_failsafe.cc:
Use my_global.h first
sql/rpl_filter.cc:
Use my_global.h first
sql/rpl_gtid.cc:
Use my_global.h first
sql/rpl_handler.cc:
Use my_global.h first
sql/rpl_injector.cc:
Use my_global.h first
sql/rpl_record.cc:
Use my_global.h first
sql/rpl_record_old.cc:
Use my_global.h first
sql/rpl_reporting.cc:
Use my_global.h first
sql/rpl_rli.cc:
Use my_global.h first
sql/rpl_tblmap.cc:
Use my_global.h first
sql/rpl_utility.cc:
Use my_global.h first
sql/set_var.cc:
Added comment
sql/slave.cc:
Use my_global.h first
sql/sp.cc:
Use my_global.h first
sql/sp_cache.cc:
Use my_global.h first
sql/sp_head.cc:
Use my_global.h first
sql/sp_pcontext.cc:
Use my_global.h first
sql/sp_rcontext.cc:
Use my_global.h first
sql/spatial.cc:
Use my_global.h first
sql/sql_acl.cc:
Use my_global.h first
sql/sql_admin.cc:
Use my_global.h first
sql/sql_analyse.cc:
Use my_global.h first
sql/sql_audit.cc:
Use my_global.h first
sql/sql_base.cc:
Use my_global.h first
sql/sql_binlog.cc:
Use my_global.h first
sql/sql_bootstrap.cc:
Use my_global.h first
Use my_global.h first
sql/sql_cache.cc:
Use my_global.h first
sql/sql_class.cc:
Use my_global.h first
sql/sql_client.cc:
Use my_global.h first
sql/sql_connect.cc:
Use my_global.h first
sql/sql_crypt.cc:
Use my_global.h first
sql/sql_cursor.cc:
Use my_global.h first
sql/sql_db.cc:
Use my_global.h first
sql/sql_delete.cc:
Use my_global.h first
sql/sql_derived.cc:
Use my_global.h first
sql/sql_do.cc:
Use my_global.h first
sql/sql_error.cc:
Use my_global.h first
sql/sql_explain.cc:
Use my_global.h first
sql/sql_expression_cache.cc:
Use my_global.h first
sql/sql_handler.cc:
Use my_global.h first
sql/sql_help.cc:
Use my_global.h first
sql/sql_insert.cc:
Use my_global.h first
sql/sql_lex.cc:
Use my_global.h first
sql/sql_load.cc:
Use my_global.h first
sql/sql_locale.cc:
Use my_global.h first
sql/sql_manager.cc:
Use my_global.h first
sql/sql_parse.cc:
Use my_global.h first
sql/sql_partition.cc:
Use my_global.h first
sql/sql_plugin.cc:
Added comment
sql/sql_prepare.cc:
Use my_global.h first
sql/sql_priv.h:
Added error if we use this before including my_global.h
This check is here becasue so many files includes sql_priv.h first.
sql/sql_profile.cc:
Use my_global.h first
sql/sql_reload.cc:
Use my_global.h first
sql/sql_rename.cc:
Use my_global.h first
sql/sql_repl.cc:
Use my_global.h first
sql/sql_select.cc:
Use my_global.h first
sql/sql_servers.cc:
Use my_global.h first
sql/sql_show.cc:
Added comment
sql/sql_signal.cc:
Use my_global.h first
sql/sql_statistics.cc:
Use my_global.h first
sql/sql_table.cc:
Use my_global.h first
sql/sql_tablespace.cc:
Use my_global.h first
sql/sql_test.cc:
Use my_global.h first
sql/sql_time.cc:
Use my_global.h first
sql/sql_trigger.cc:
Use my_global.h first
sql/sql_udf.cc:
Use my_global.h first
sql/sql_union.cc:
Use my_global.h first
sql/sql_update.cc:
Use my_global.h first
sql/sql_view.cc:
Use my_global.h first
sql/sys_vars.cc:
Added comment
sql/table.cc:
Use my_global.h first
sql/thr_malloc.cc:
Use my_global.h first
sql/transaction.cc:
Use my_global.h first
sql/uniques.cc:
Use my_global.h first
sql/unireg.cc:
Use my_global.h first
sql/unireg.h:
Removed inclusion of my_global.h
storage/archive/ha_archive.cc:
Added comment
storage/blackhole/ha_blackhole.cc:
Use my_global.h first
storage/csv/ha_tina.cc:
Use my_global.h first
storage/csv/transparent_file.cc:
Use my_global.h first
storage/federated/ha_federated.cc:
Use my_global.h first
storage/federatedx/federatedx_io.cc:
Use my_global.h first
storage/federatedx/federatedx_io_mysql.cc:
Use my_global.h first
storage/federatedx/federatedx_io_null.cc:
Use my_global.h first
storage/federatedx/federatedx_txn.cc:
Use my_global.h first
storage/heap/ha_heap.cc:
Use my_global.h first
storage/innobase/handler/handler0alter.cc:
Use my_global.h first
storage/maria/ha_maria.cc:
Use my_global.h first
storage/maria/unittest/ma_maria_log_cleanup.c:
Remove duplicated include files
storage/maria/unittest/test_file.c:
Added comment
storage/myisam/ha_myisam.cc:
Move sql_plugin.h first as this includes my_global.h
storage/myisammrg/ha_myisammrg.cc:
Use my_global.h first
storage/oqgraph/oqgraph_thunk.cc:
Use my_config.h and my_global.h first
One could not include my_global.h before oqgraph_thunk.h (don't know why)
storage/spider/ha_spider.cc:
Use my_global.h first
storage/spider/hs_client/config.cpp:
Use my_global.h first
storage/spider/hs_client/escape.cpp:
Use my_global.h first
storage/spider/hs_client/fatal.cpp:
Use my_global.h first
storage/spider/hs_client/hstcpcli.cpp:
Use my_global.h first
storage/spider/hs_client/socket.cpp:
Use my_global.h first
storage/spider/hs_client/string_util.cpp:
Use my_global.h first
storage/spider/spd_conn.cc:
Use my_global.h first
storage/spider/spd_copy_tables.cc:
Use my_global.h first
storage/spider/spd_db_conn.cc:
Use my_global.h first
storage/spider/spd_db_handlersocket.cc:
Use my_global.h first
storage/spider/spd_db_mysql.cc:
Use my_global.h first
storage/spider/spd_db_oracle.cc:
Use my_global.h first
storage/spider/spd_direct_sql.cc:
Use my_global.h first
storage/spider/spd_i_s.cc:
Use my_global.h first
storage/spider/spd_malloc.cc:
Use my_global.h first
storage/spider/spd_param.cc:
Use my_global.h first
storage/spider/spd_ping_table.cc:
Use my_global.h first
storage/spider/spd_sys_table.cc:
Use my_global.h first
storage/spider/spd_table.cc:
Use my_global.h first
storage/spider/spd_trx.cc:
Use my_global.h first
storage/xtradb/handler/handler0alter.cc:
Use my_global.h first
storage/xtradb/handler/i_s.cc:
Use my_global.h first
This was missing in my last commit for fixing possible lockups in SHOW STATUS.
sql/log.cc:
Fixed comment
sql/sql_show.cc:
Use LOCK_show_status when we add things to all_status_vars
sql/sql_test.cc:
Remove not needed mutex_lock
If the slave gets a reconnect in the middle of a GTID event group, normally
it will re-fetch that event group, skipping the first part that was already
queued for the SQL thread.
However, if the master crashed while writing the event group, the group is
incomplete. This patch detects this case and makes sure that the
transaction is rolled back and nothing is skipped from any following
event groups.
Similarly, a network proxy might cause the reconnect to end up on a
different master server. Detect this by noticing a different server_id,
and similarly in this case roll back the partially received group.
Merged lp:maria/maria-10.0-galera up to revision 3880.
Added a new functions to handler API to forcefully abort_transaction,
producing fake_trx_id, get_checkpoint and set_checkpoint for XA. These
were added for future possiblity to add more storage engines that
could use galera replication.
Merged lp:maria/maria-10.0-galera up to revision 3879.
Added a new functions to handler API to forcefully abort_transaction,
producing fake_trx_id, get_checkpoint and set_checkpoint for XA. These
were added for future possiblity to add more storage engines that
could use galera replication.
mysqldump:
- Added --log-queries to allow one to disable logging for the dump
sql/log_event.cc:
- Removed setting of enable_slow_log as it's not required anymore.
sql/sql_parse.cc:
- Set enable_slow_log to value of thd->variables.sql_log_slow as this will speed up tests if slow log is disabled.
- opt_log_slow_admin_statements can now only disable slow log, not enable it.
sql/sql_explain.cc:
- Minor cleanup
Other things:
- Added sql_log_slow to system variables.
- Changed opt_slow_log to global_system_variables.sql_log_slow in all files
- Updated tests to reflect changes
bzr merge -r4264 maria/5.5
Text conflict in sql/mysqld.cc
Text conflict in storage/xtradb/btr/btr0cur.c
Text conflict in storage/xtradb/buf/buf0buf.c
Text conflict in storage/xtradb/buf/buf0lru.c
Text conflict in storage/xtradb/handler/ha_innodb.cc
5 conflicts encountered.
GOES AWAY, MYSQL QUITS WORKING.
Analysis:
-----------------
Issue in this bug and in bug 11907705 is, the socket file or
fifo file is set for general log at command line while starting
the server. But currently, only regular file can be set for the
general log. Instead of reporting any error, the provided files
are opened for writing and continued. Because of this issues
mentioned in the bug reports are seen.
As mentioned, only when any non-regular file is set for general
log at command line while starting the server, these issues are
seen. If general log file is set to non-regular file from CLI
using system variable general_log_file then error is reported.
These issues can also be faced with slow query log file, if it is
set to non-regular file.
Fix:
-----------------
Currently while starting the server if we fail to open log file
then we report an error, disable logging to file and continue.
To fix issue reported code is modified to check whether file
is regular file or not before opening it. If file is not a
regular file then error is logged to error log and logging to
file is disabled.
GOES AWAY, MYSQL QUITS WORKING.
Analysis:
-----------------
Issue in this bug and in bug 11907705 is, the socket file or
fifo file is set for general log at command line while starting
the server. But currently, only regular file can be set for the
general log. Instead of reporting any error, the provided files
are opened for writing and continued. Because of this issues
mentioned in the bug reports are seen.
As mentioned, only when any non-regular file is set for general
log at command line while starting the server, these issues are
seen. If general log file is set to non-regular file from CLI
using system variable general_log_file then error is reported.
These issues can also be faced with slow query log file, if it is
set to non-regular file.
Fix:
-----------------
Currently while starting the server if we fail to open log file
then we report an error, disable logging to file and continue.
To fix issue reported code is modified to check whether file
is regular file or not before opening it. If file is not a
regular file then error is logged to error log and logging to
file is disabled.
Merge the patches into MariaDB 10.0 main.
With this patch, parallel replication will now automatically retry a
transaction that fails due to deadlock or other temporary error, same as
single-threaded replication.
We catch deadlocks with InnoDB transactions due to enforced commit order. If
T1 must commit before T2 in parallel replication and T1 ends up waiting for T2
inside InnoDB, we kill T2 and retry it later to resolve the deadlock
automatically.
After-review changes.
For this patch in 10.0, we do not introduce a new public storage engine API,
we just fix the InnoDB/XtraDB issues. In 10.1, we will make a better public
API that can be used for all storage engines (MDEV-6429).
Eliminate the background thread that did deadlock kills asynchroneously.
Instead, we ensure that the InnoDB/XtraDB code can handle doing the kill from
inside the deadlock detection code (when thd_report_wait_for() needs to kill a
later thread to resolve a deadlock).
(We preserve the part of the original patch that introduces dedicated mutex
and condition for the slave init thread, to remove the abuse of
LOCK_thread_count for start/stop synchronisation of the slave init thread).
- Make log_slow_verbosity print "Priority_queue: (Yes|No)" into the slow query log.
(but we do not add a correspoding column to P_S.*statement* tables).
This is MySQL Bug#59123. The message string stored in an INCIDENT event was
not zero-terminated. This caused any following checksum bytes (if enabled on
the master) to be output to the error log as trailing garbage when the message
was printed to the error log.
Backport the patch from MySQL 5.6:
revno: 2876.228.200
revision-id: zhenxing.he@sun.com-20110111051323-w2xnzvcjn46x6h6u
committer: He Zhenxing <zhenxing.he@sun.com>
timestamp: Tue 2011-01-11 13:13:23 +0800
message:
BUG#59123 rpl_stm_binlog_max_cache_size fails sporadically with found warnings
Also add a test case.
server initialization
ER() macro was used during server initialization. It refers to
current_thd, which is not available that early.
Print error to error log in "lc-messages" locale.
Avoid duplicate error message during server initialization.
Auto-generate the allowed list of values for enum/set/flagset options
in --help output. But don't do that when the help text already has them.
Also, remove lists of values from help strings of various options, where
they were simply listed without any additional information.
replication causing replication to fail.
Remove the temporary fix for MDEV-5914, which used READ COMMITTED for parallel
replication worker threads. Replace it with a better, more selective solution.
The issue is with certain edge cases of InnoDB gap locks, for example between
INSERT and ranged DELETE. It is possible for the gap lock set by the DELETE to
block the INSERT, if the DELETE runs first, while the record lock set by
INSERT does not block the DELETE, if the INSERT runs first. This can cause a
conflict between the two in parallel replication on the slave even though they
ran without conflicts on the master.
With this patch, InnoDB will ask the server layer about the two involved
transactions before blocking on a gap lock. If the server layer tells InnoDB
that the transactions are already fixed wrt. commit order, as they are in
parallel replication, InnoDB will ignore the gap lock and allow the two
transactions to proceed in parallel, avoiding the conflict.
Improve the fix for MDEV-6020. When InnoDB itself detects a deadlock, it now
asks the server layer for any preferences about which transaction to roll
back. In case of parallel replication with two transactions T1 and T2 fixed to
commit T1 before T2, the server layer will ask InnoDB to roll back T2 as the
deadlock victim, not T1. This helps in some cases to avoid excessive deadlock
rollback, as T2 will in any case need to wait for T1 to complete before it can
itself commit.
Also some misc. fixes found during development and testing:
- Remove thd_rpl_is_parallel(), it is not used or needed.
- Use KILL_CONNECTION instead of KILL_QUERY when a parallel replication
worker thread is killed to resolve a deadlock with fixed commit
ordering. There are some cases, eg. in sql/sql_parse.cc, where a KILL_QUERY
can be ignored if the query otherwise completed successfully, and this
could cause the deadlock kill to be lost, so that the deadlock was not
correctly resolved.
- Fix random test failure due to missing wait_for_binlog_checkpoint.inc.
- Make sure that deadlock or other temporary errors during parallel
replication are not printed to the the error log; there were some places
around the replication code with extra error logging. These conditions can
occur occasionally and are handled automatically without breaking
replication, so they should not pollute the error log.
- Fix handling of rgi->gtid_sub_id. We need to be able to access this also at
the end of a transaction, to be able to detect and resolve deadlocks due to
commit ordering. But this value was also used as a flag to mark whether
record_gtid() had been called, by being set to zero, losing the value. Now,
introduce a separate flag rgi->gtid_pending, so rgi->gtid_sub_id remains
valid for the entire duration of the transaction.
- Fix one place where the code to handle ignored errors called reset_killed()
unconditionally, even if no error was caught that should be ignored. This
could cause loss of a deadlock kill signal, breaking deadlock detection and
resolution.
- Fix a couple of missing mysql_reset_thd_for_next_command(). This could
cause a prior error condition to remain for the next event executed,
causing assertions about errors already being set and possibly giving
incorrect error handling for following event executions.
- Fix code that cleared thd->rgi_slave in the parallel replication worker
threads after each event execution; this caused the deadlock detection and
handling code to not be able to correctly process the associated
transactions as belonging to replication worker threads.
- Remove useless error code in slave_background_kill_request().
- Fix bug where wfc->wakeup_error was not cleared at
wait_for_commit::unregister_wait_for_prior_commit(). This could cause the
error condition to wrongly propagate to a later wait_for_prior_commit(),
causing spurious ER_PRIOR_COMMIT_FAILED errors.
- Do not put the binlog background thread into the processlist. It causes
too many result differences in mtr, but also it probably is not useful
for users to pollute the process list with a system thread that does not
really perform any user-visible tasks...
replication causing replication to fail.
In parallel replication, we run transactions from the master in parallel, but
force them to commit in the same order they did on the master. If we force T1
to commit before T2, but T2 holds eg. a row lock that is needed by T1, we get
a deadlock when T2 waits until T1 has committed.
Usually, we do not run T1 and T2 in parallel if there is a chance that they
can have conflicting locks like this, but there are certain edge cases where
it can occasionally happen (eg. MDEV-5914, MDEV-5941, MDEV-6020). The bug was
that this would cause replication to hang, eventually getting a lock timeout
and causing the slave to stop with error.
With this patch, InnoDB will report back to the upper layer whenever a
transactions T1 is about to do a lock wait on T2. If T1 and T2 are parallel
replication transactions, and T2 needs to commit later than T1, we can thus
detect the deadlock; we then kill T2, setting a flag that causes it to catch
the kill and convert it to a deadlock error; this error will then cause T2 to
roll back and release its locks (so that T1 can commit), and later T2 will be
re-tried and eventually also committed.
The kill happens asynchroneously in a slave background thread; this is
necessary, as the reporting from InnoDB about lock waits happen deep inside
the locking code, at a point where it is not possible to directly call
THD::awake() due to mutexes held.
Deadlock is assumed to be (very) rarely occuring, so this patch tries to
minimise the performance impact on the normal case where no deadlocks occur,
rather than optimise the handling of the occasional deadlock.
Also fix transaction retry due to deadlock when it happens after a transaction
already signalled to later transactions that it started to commit. In this
case we need to undo this signalling (and later redo it when we commit again
during retry), so following transactions will not start too early.
Also add a missing thd->send_kill_message() that got triggered during testing
(this corrects an incorrect fix for MySQL Bug#58933).
Handle retry of event groups that span multiple relay log files.
- If retry reaches the end of one relay log file, move on to the next.
- Handle refcounting of relay log files, and avoid purging relay log
files until all event groups have completed that might have needed
them for transaction retry.
SHOW PROCESSLIST, SHOW BINLOGS
Problem: A deadlock was occurring when 4 threads were
involved in acquiring locks in the following way
Thread 1: Dump thread ( Slave is reconnecting, so on
Master, a new dump thread is trying kill
zombie dump threads. It acquired thread's
LOCK_thd_data and it is about to acquire
mysys_var->current_mutex ( which LOCK_log)
Thread 2: Application thread is executing show binlogs and
acquired LOCK_log and it is about to acquire
LOCK_index.
Thread 3: Application thread is executing Purge binary logs
and acquired LOCK_index and it is about to
acquire LOCK_thread_count.
Thread 4: Application thread is executing show processlist
and acquired LOCK_thread_count and it is
about to acquire zombie dump thread's
LOCK_thd_data.
Deadlock Cycle:
Thread 1 -> Thread 2 -> Thread 3-> Thread 4 ->Thread 1
The same above deadlock was observed even when thread 4 is
executing 'SELECT * FROM information_schema.processlist' command and
acquired LOCK_thread_count and it is about to acquire zombie
dump thread's LOCK_thd_data.
Analysis:
There are four locks involved in the deadlock. LOCK_log,
LOCK_thread_count, LOCK_index and LOCK_thd_data.
LOCK_log, LOCK_thread_count, LOCK_index are global mutexes
where as LOCK_thd_data is local to a thread.
We can divide these four locks in two groups.
Group 1 consists of LOCK_log and LOCK_index and the order
should be LOCK_log followed by LOCK_index.
Group 2 consists of other two mutexes
LOCK_thread_count, LOCK_thd_data and the order should
be LOCK_thread_count followed by LOCK_thd_data.
Unfortunately, there is no specific predefined lock order defined
to follow in the MySQL system when it comes to locks across these
two groups. In the above problematic example,
there is no problem in the way we are acquiring the locks
if you see each thread individually.
But If you combine all 4 threads, they end up in a deadlock.
Fix:
Since everything seems to be fine in the way threads are taking locks,
In this patch We are changing the duration of the locks in Thread 4
to break the deadlock. i.e., before the patch, Thread 4
('show processlist' command) mysqld_list_processes()
function acquires LOCK_thread_count for the complete duration
of the function and it also acquires/releases
each thread's LOCK_thd_data.
LOCK_thread_count is used to protect addition and
deletion of threads in global threads list. While show
process list is looping through all the existing threads,
it will be a problem if a thread is exited but there is no problem
if a new thread is added to the system. Hence a new mutex is
introduced "LOCK_thd_remove" which will protect deletion
of a thread from global threads list. All threads which are
getting exited should acquire LOCK_thd_remove
followed by LOCK_thread_count. (It should take LOCK_thread_count
also because other places of the code still thinks that exit thread
is protected with LOCK_thread_count. In this fix, we are changing
only 'show process list' query logic )
(Eg: unlink_thd logic will be protected with
LOCK_thd_remove).
Logic of mysqld_list_processes(or file_schema_processlist)
will now be protected with 'LOCK_thd_remove' instead of
'LOCK_thread_count'.
Now the new locking order after this patch is:
LOCK_thd_remove -> LOCK_thd_data -> LOCK_log ->
LOCK_index -> LOCK_thread_count
SHOW PROCESSLIST, SHOW BINLOGS
Problem: A deadlock was occurring when 4 threads were
involved in acquiring locks in the following way
Thread 1: Dump thread ( Slave is reconnecting, so on
Master, a new dump thread is trying kill
zombie dump threads. It acquired thread's
LOCK_thd_data and it is about to acquire
mysys_var->current_mutex ( which LOCK_log)
Thread 2: Application thread is executing show binlogs and
acquired LOCK_log and it is about to acquire
LOCK_index.
Thread 3: Application thread is executing Purge binary logs
and acquired LOCK_index and it is about to
acquire LOCK_thread_count.
Thread 4: Application thread is executing show processlist
and acquired LOCK_thread_count and it is
about to acquire zombie dump thread's
LOCK_thd_data.
Deadlock Cycle:
Thread 1 -> Thread 2 -> Thread 3-> Thread 4 ->Thread 1
The same above deadlock was observed even when thread 4 is
executing 'SELECT * FROM information_schema.processlist' command and
acquired LOCK_thread_count and it is about to acquire zombie
dump thread's LOCK_thd_data.
Analysis:
There are four locks involved in the deadlock. LOCK_log,
LOCK_thread_count, LOCK_index and LOCK_thd_data.
LOCK_log, LOCK_thread_count, LOCK_index are global mutexes
where as LOCK_thd_data is local to a thread.
We can divide these four locks in two groups.
Group 1 consists of LOCK_log and LOCK_index and the order
should be LOCK_log followed by LOCK_index.
Group 2 consists of other two mutexes
LOCK_thread_count, LOCK_thd_data and the order should
be LOCK_thread_count followed by LOCK_thd_data.
Unfortunately, there is no specific predefined lock order defined
to follow in the MySQL system when it comes to locks across these
two groups. In the above problematic example,
there is no problem in the way we are acquiring the locks
if you see each thread individually.
But If you combine all 4 threads, they end up in a deadlock.
Fix:
Since everything seems to be fine in the way threads are taking locks,
In this patch We are changing the duration of the locks in Thread 4
to break the deadlock. i.e., before the patch, Thread 4
('show processlist' command) mysqld_list_processes()
function acquires LOCK_thread_count for the complete duration
of the function and it also acquires/releases
each thread's LOCK_thd_data.
LOCK_thread_count is used to protect addition and
deletion of threads in global threads list. While show
process list is looping through all the existing threads,
it will be a problem if a thread is exited but there is no problem
if a new thread is added to the system. Hence a new mutex is
introduced "LOCK_thd_remove" which will protect deletion
of a thread from global threads list. All threads which are
getting exited should acquire LOCK_thd_remove
followed by LOCK_thread_count. (It should take LOCK_thread_count
also because other places of the code still thinks that exit thread
is protected with LOCK_thread_count. In this fix, we are changing
only 'show process list' query logic )
(Eg: unlink_thd logic will be protected with
LOCK_thd_remove).
Logic of mysqld_list_processes(or file_schema_processlist)
will now be protected with 'LOCK_thd_remove' instead of
'LOCK_thread_count'.
Now the new locking order after this patch is:
LOCK_thd_remove -> LOCK_thd_data -> LOCK_log ->
LOCK_index -> LOCK_thread_count
Fixed use-copy option to mysql-test-run
mysql-test/mysql-test-run.pl:
Fixed use-copy and added comment
sql/log.cc:
Make copy_up_file_and_fill() safe for disk full
mysql-test/r/create_or_replace.result:
More tests for create or replace
mysql-test/t/create_or_replace.test:
More tests for create or replace
sql/log.cc:
Don't use binlog_hton if binlog is not enabmed
sql/sql_base.cc:
We have to call restart_trans_for_tables also if tables where not locked with LOCK TABLES.
If not, we will get a crash in TokuDB
sql/sql_insert.cc:
Don't call binlog_reset_cache() if we don't have binary log open
sql/sql_table.cc:
Don't log to binary log if not open
Better test if we where using create or replace ... select
storage/tokudb/mysql-test/tokudb_mariadb/r/create_or_replace.result:
More tests for create or replace
storage/tokudb/mysql-test/tokudb_mariadb/t/create_or_replace.test:
More tests for create or replace
Bug #3329 Incomplete lower_case_table_names=2 implementation
The problem was that check_db_name() converted database names to lower case also in case of lower_case_table_names=2.
Fixed by removing the conversion in check_db_name for lower_case_table_names = 2 and instead converting db name to
lower case at same places as table names are converted.
Fixed bug that SHOW CREATE DATABASE FOO showed information for database 'foo'.
I also removed some checks of lower_case_table_names when it was enough to use table_alias_charset.
mysql-test/mysql-test-run.pl:
Added --use-copy argument to force mysql-test-run to copy files instead of doing symlinks. This is needed when you run
with test directory on another file system
mysql-test/r/lowercase_table.result:
Updated results
mysql-test/r/lowercase_table2.result:
Updated results
mysql-test/suite/parts/r/partition_mgm_lc2_innodb.result:
Updated results
mysql-test/suite/parts/r/partition_mgm_lc2_memory.result:
Updated results
mysql-test/suite/parts/r/partition_mgm_lc2_myisam.result:
Updated results
mysql-test/t/lowercase_table.test:
Added tests with mixed case databases
mysql-test/t/lowercase_table2.test:
Added tests with mixed case databases
sql/log.cc:
Don't check lower_case_table_names when we can use table_alias_charset
sql/sql_base.cc:
Don't check lower_case_table_names when we can use table_alias_charset
sql/sql_db.cc:
Use cmp_db_names() for checking if current database changed.
mysql_rm_db() now converts db to lower case if lower_case_table_names was used.
Changed database options cache to use table_alias_charset. This fixed a bug where SHOW CREATE DATABASE showed wrong information.
sql/sql_parse.cc:
Change also db name to lower case when file names are changed.
Don't need to story copy of database name anymore when lower_case_table_names == 2 as check_db_name() don't convert in this case.
Updated arguments to mysqld_show_create_db().
When adding table to TABLE_LIST also convert db name to lower case if needed (same way as we do with table names).
sql/sql_show.cc:
mysqld_show_create_db() now also takes original name as argument for output to user.
sql/sql_show.h:
Updated prototype for mysqld_show_create_db()
sql/sql_table.cc:
In mysql_rename_table(), do same conversions to database name as we do for the file name
Now if CREATE OR REPLACE fails but we have deleted a table already, we will generate a DROP TABLE in the binary log.
This fixes this issue.
In addition, for a failing CREATE OR REPLACE TABLE ... SELECT we don't generate a log of all the inserted rows, only the DROP TABLE.
I added code for not logging DROP TEMPORARY TABLE for tables where the CREATE TABLE was not logged. This code will be activated in 10.1
by removing the code protected by DONT_LOG_DROP_OF_TEMPORARY_TABLES.
mysql-test/suite/rpl/r/create_or_replace_mix.result:
More test cases
mysql-test/suite/rpl/r/create_or_replace_row.result:
More test cases
mysql-test/suite/rpl/r/create_or_replace_statement.result:
More test cases
mysql-test/suite/rpl/t/create_or_replace.inc:
More test cases
sql/log.cc:
Added binlog_reset_cache() to clear the binary log.
sql/log.h:
Added prototype
sql/sql_insert.cc:
If CREATE OR REPLACE TABLE ... SELECT fails:
- Don't log anything if nothing changed
- If table was deleted, log a DROP TABLE.
Remember if we table creation of temporary tables was logged.
sql/sql_table.cc:
Added log_drop_table()
Remember if we table creation of temporary tables was logged.
If CREATE OR REPLACE TABLE ... SELECT fails and a table was deleted, log a DROP TABLE.
sql/sql_table.h:
Added prototype
sql/sql_truncate.cc:
Remember if we table creation of temporary tables was logged.
sql/table.h:
Added table_creation_was_logged
