1. Add explicit indication that the output is produced by
SHOW EXPLAIN/ANALYZE FORMAT=JSON command.
2. Remove useless "r_total_time_ms" field from SHOW ANALYZE FORMAT=JSON
output when there is no timed statistics gathered.
3. Add "r_query_time_in_progress_ms" to the output of SHOW ANALYZE FORMAT=JSON.
Implicit system-versioned table does not contain system fields in SHOW
CREATE. Therefore after mysqldump recovery such table has system
fields in the last place in frm image. The original table meanwhile
does not guarantee these system fields on last place because adding
new fields via ALTER TABLE places them last. Thus the order of fields
may be different between master and slave, so row-based replication
may fail.
To fix this on ALTER TABLE we now place system-invisible fields always
last in frm image. If the table was created via old revision and has
an incorrect order of fields it can be fixed via any copy operation of
ALTER TABLE, f.ex.:
ALTER TABLE t1 FORCE;
To check the order of fields in frm file one can use hexdump:
hexdump -C t1.frm
Note, the replication fails only when all 3 conditions are met:
1. row-based or mixed mode replication;
2. table has new fields added via ALTER TABLE;
3. table was rebuilt on some, but not all nodes via mysqldump image.
Otherwise it will operate properly even with incorrect order of
fields.
The --skip-write-binlog message was confusing that it only had
an effect if the galera was enabled. There are uses beyond galera
so we apply SET SESSION SQL_LOG_BIN=0 as implied by the option
without being conditional on the wsrep status.
We also with --skip-write-binlog actually check the session @@WSREP_ON
variable rather than the global server variable.
Since 10.6, the wsrep_mode could replicate Aria and MyISAM, in which
case no change to innodb and back is needed.
By removing the conditions, we can use LOCK TABLES in a general case
improving the load speed of Aria (MDEV-23326), regardless of the
skip-write-binlog flag. The only case where we don't use LOCK TABLES is
when we are replicating via Innodb, because wsrep_on=1 and wsrep_mode
doesn't contain REPLICATE_ARIA{,MYISAM}. This uses an Innodb transaction
instead. When replicating via InnoDB we change the table engine type
back to what it was originally.
By removing the \d and other syntax that requires parsing by
the mariadb client, we can use the generated SQL more generally, like
in the embedded server.
We also save and restore the SQL_LOG_BIN and WSREP_ON session server
variables so this can be included in the same session as other data
without taking into changes in state.
Remove wsrep.mysql_tzinfo_to_sql_symlink{,_skip} tests as they offered
no additional coverage beyond main.mysql_tzinfo_to_sql_symlink (no
server testing was done).
Add galera.mariadb_tzinfo_to_sql to actually test the replication
of tzinfo data through galera.
The conditional executable comment around /*M!100602 ...
START TRANSACTION .. LOCK TABLES.. */ is so that we can provide tzinfo
files (MDEV-27113, MDBF-389) and in the case that a user uses it on a
pre-10.6 server version it will still work. Both START TRANSACTION and
LOCK TABLES are not supported in prepared statements in MariaDB versions
earlier than 10.6.2.
Reviewed by Brandon Nesterenko
We will remove the parameter innodb_disallow_writes because it is badly
designed and implemented. The parameter was never allowed at startup.
It was only internally used by Galera snapshot transfer.
If a user executed
SET GLOBAL innodb_disallow_writes=ON;
the server could hang even on subsequent read operations.
During Galera snapshot transfer, we will block writes
to implement an rsync friendly snapshot, as follows:
sst_flush_tables() will acquire a global lock by executing
FLUSH TABLES WITH READ LOCK, which will block any writes
at the high level.
sst_disable_innodb_writes(), invoked via ha_disable_internal_writes(true),
will suspend or disable InnoDB background tasks or threads that could
initiate writes. As part of this, log_make_checkpoint() will be invoked
to ensure that anything in the InnoDB buf_pool.flush_list will be written
to the data files. This has the nice side effect that the Galera joiner
will avoid crash recovery.
The changes to sql/wsrep.cc and to the tests are based on a prototype
that was developed by Jan Lindström.
Reviewed by: Jan Lindström
The call mtr.add_suppression() that was added
in commit 75b7cd680b
for MemorySanitizer and Valgrind runs is causing
a result difference for the test rpl.rpl_gtid_stop_start.
Let us disable the binlog for executing that statement.
Also, the test perfschema.statement_program_lost_inst
would fail due to the changes to have_innodb.inc in this commit.
To compensate for that, we will make more --suite=perfschema
tests run without InnoDB, and explicitly enable InnoDB in
those tests that depend on a transactional storage engine.
A few regression tests invoke heavy flushing of the buffer pool
and may trigger warnings that tablespaces could not be deleted
because of pending writes. Those warnings are to be expected
during the execution of such tests.
The warnings are also frequently seen with Valgrind or MemorySanitizer.
For those, the global suppression in have_innodb.inc does the trick.
Integration with status reporter in wsrep-lib.
Status reporter reports changes in wsrep state and logged errors/
warnings to a json file which then can be read and interpreted by
an external monitoring tool.
Rationale: until the server is fully initialized it is unaccessible
by client and the only source of information is an error log which
is not machine-friendly. Since wsrep node can spend a very long time
in initialization phase (state transfer), it may be a very long time
that automatic tools can't easily monitor its liveness and progression.
New variable: wsrep_status_file specifies the output file name.
If not set, no file is created and no reporting is done.
Reviewed-by: Jan Lindström <jan.lindstrom@mariadb.com>
Added ability to disable/enable (--disable_view_protocol/--enable_view_protocol) view-protocol in tests.
When the option "--disable_view_protocol" is used util connections are closed.
Added new test for checking view-protocol
- Revert wrongly record embedded result files. These were either
recorded with normal server (not embedded) or an embedded server
with not default compile option. This can be seen that the committed
result file had replication variables which should never happen.
- Reverted back change of include/is_embedded.inc. One cannot check for
$MYSQL_EMBEDDED as this only tells if there exists an embedded
server, not if the current server we are testing is the embedded
server. This could easily be verified by doing
'mtr sys_vars.sysvars_server_embedded'. This would fail with a wrong
result instead of being marked as skipped as --embedded was not
used.
This commit implements two phase binloggable ALTER.
When a new
@@session.binlog_alter_two_phase = YES
ALTER query gets logged in two parts, the START ALTER and the COMMIT
or ROLLBACK ALTER. START Alter is written in binlog as soon as
necessary locks have been acquired for the table. The timing is
such that any concurrent DML:s that update the same table are either
committed, thus logged into binary log having done work on the old
version of the table, or will be queued for execution on its new
version.
The "COMPLETE" COMMIT or ROLLBACK ALTER are written at the very point
of a normal "single-piece" ALTER that is after the most of
the query work is done. When its result is positive COMMIT ALTER is
written, otherwise ROLLBACK ALTER is written with specific error
happened after START ALTER phase.
Replication of two-phase binloggable ALTER is
cross-version safe. Specifically the OLD slave merely does not
recognized the start alter part, still being able to process and
memorize its gtid.
Two phase logged ALTER is read from binlog by mysqlbinlog to produce
BINLOG 'string', where 'string' contains base64 encoded
Query_log_event containing either the start part of ALTER, or a
completion part. The Query details can be displayed with `-v` flag,
similarly to ROW format events. Notice, mysqlbinlog output containing
parts of two-phase binloggable ALTER is processable correctly only by
binlog_alter_two_phase server.
@@log_warnings > 2 can reveal details of binlogging and slave side
processing of the ALTER parts.
The current commit also carries fixes to the following list of
reported bugs:
MDEV-27511, MDEV-27471, MDEV-27349, MDEV-27628, MDEV-27528.
Thanks to all people involved into early discussion of the feature
including Kristian Nielsen, those who helped to design, implement and
test: Sergei Golubchik, Andrei Elkin who took the burden of the
implemenation completion, Sujatha Sivakumar, Brandon
Nesterenko, Alice Sherepa, Ramesh Sivaraman, Jan Lindstrom.
mtr is checking the wrong path for the embedded executable
on out of tree builds.
The is_embedded.inc tests are also checking the version rather
than the MTR MYSQL_EMBEDDED environment variable.
As a result, a few tests are out of date in the result recordings.
The InnoDB redo log used to be formatted in blocks of 512 bytes.
The log blocks were encrypted and the checksum was calculated while
holding log_sys.mutex, creating a serious scalability bottleneck.
We remove the fixed-size redo log block structure altogether and
essentially turn every mini-transaction into a log block of its own.
This allows encryption and checksum calculations to be performed
on local mtr_t::m_log buffers, before acquiring log_sys.mutex.
The mutex only protects a memcpy() of the data to the shared
log_sys.buf, as well as the padding of the log, in case the
to-be-written part of the log would not end in a block boundary of
the underlying storage. For now, the "padding" consists of writing
a single NUL byte, to allow recovery and mariadb-backup to detect
the end of the circular log faster.
Like the previous implementation, we will overwrite the last log block
over and over again, until it has been completely filled. It would be
possible to write only up to the last completed block (if no more
recent write was requested), or to write dummy FILE_CHECKPOINT records
to fill the incomplete block, by invoking the currently disabled
function log_pad(). This would require adjustments to some logic around
log checkpoints, page flushing, and shutdown.
An upgrade after a crash of any previous version is not supported.
Logically empty log files from a previous version will be upgraded.
An attempt to start up InnoDB without a valid ib_logfile0 will be
refused. Previously, the redo log used to be created automatically
if it was missing. Only with with innodb_force_recovery=6, it is
possible to start InnoDB in read-only mode even if the log file
does not exist. This allows the contents of a possibly corrupted
database to be dumped.
Because a prepared backup from an earlier version of mariadb-backup
will create a 0-sized log file, we will allow an upgrade from such
log files, provided that the FIL_PAGE_FILE_FLUSH_LSN in the system
tablespace looks valid.
The 512-byte log checkpoint blocks at 0x200 and 0x600 will be replaced
with 64-byte log checkpoint blocks at 0x1000 and 0x2000.
The start of log records will move from 0x800 to 0x3000. This allows us
to use 4096-byte aligned blocks for all I/O in a future revision.
We extend the MDEV-12353 redo log record format as follows.
(1) Empty mini-transactions or extra NUL bytes will not be allowed.
(2) The end-of-minitransaction marker (a NUL byte) will be replaced
with a 1-bit sequence number, which will be toggled each time when the
circular log file wraps back to the beginning.
(3) After the sequence bit, a CRC-32C checksum of all data
(excluding the sequence bit) will written.
(4) If the log is encrypted, 8 bytes will be written before
the checksum and included in it. This is part of the
initialization vector (IV) of encrypted log data.
(5) File names, page numbers, and checkpoint information will not be
encrypted. Only the payload bytes of page-level log will be encrypted.
The tablespace ID and page number will form part of the IV.
(6) For padding, arbitrary-length FILE_CHECKPOINT records may be written,
with all-zero payload, and with the normal end marker and checksum.
The minimum size is 7 bytes, or 7+8 with innodb_encrypt_log=ON.
In mariadb-backup and in Galera snapshot transfer (SST) scripts, we will
no longer remove ib_logfile0 or create an empty ib_logfile0. Server startup
will require a valid log file. When resizing the log, we will create
a logically empty ib_logfile101 at the current LSN and use an atomic rename
to replace ib_logfile0 with it. See the test innodb.log_file_size.
Because there is no mandatory padding in the log file, we are able
to create a dummy log file as of an arbitrary log sequence number.
See the test mariabackup.huge_lsn.
The parameter innodb_log_write_ahead_size and the
INFORMATION_SCHEMA.INNODB_METRICS counter log_padded will be removed.
The minimum value of innodb_log_buffer_size will be increased to 2MiB
(because log_sys.buf will replace recv_sys.buf) and the increment
adjusted to 4096 bytes (the maximum log block size).
The following INFORMATION_SCHEMA.INNODB_METRICS counters will be removed:
os_log_fsyncs
os_log_pending_fsyncs
log_pending_log_flushes
log_pending_checkpoint_writes
The following status variables will be removed:
Innodb_os_log_fsyncs (this is included in Innodb_data_fsyncs)
Innodb_os_log_pending_fsyncs (this was limited to at most 1 by design)
log_sys.get_block_size(): Return the physical block size of the log file.
This is only implemented on Linux and Microsoft Windows for now, and for
the power-of-2 block sizes between 64 and 4096 bytes (the minimum and
maximum size of a checkpoint block). If the block size is anything else,
the traditional 512-byte size will be used via normal file system
buffering.
If the file system buffers can be bypassed, a message like the following
will be issued:
InnoDB: File system buffers for log disabled (block size=512 bytes)
InnoDB: File system buffers for log disabled (block size=4096 bytes)
This has been tested on Linux and Microsoft Windows with both sizes.
On Linux, only enable O_DIRECT on the log for innodb_flush_method=O_DSYNC.
Tests in 3 different environments where the log is stored in a device
with a physical block size of 512 bytes are yielding better throughput
without O_DIRECT. This could be due to the fact that in the event the
last log block is being overwritten (if multiple transactions would
become durable at the same time, and each of will write a small
number of bytes to the last log block), it should be faster to re-copy
data from log_sys.buf or log_sys.flush_buf to the kernel buffer,
to be finally written at fdatasync() time.
The parameter innodb_flush_method=O_DSYNC will imply O_DIRECT for
data files. This option will enable O_DIRECT on the log file on Linux.
It may be unsafe to use when the storage device does not support
FUA (Force Unit Access) mode.
When the server is compiled WITH_PMEM=ON, we will use memory-mapped
I/O for the log file if the log resides on a "mount -o dax" device.
We will identify PMEM in a start-up message:
InnoDB: log sequence number 0 (memory-mapped); transaction id 3
On Linux, we will also invoke mmap() on any ib_logfile0 that resides
in /dev/shm, effectively treating the log file as persistent memory.
This should speed up "./mtr --mem" and increase the test coverage of
PMEM on non-PMEM hardware. It also allows users to estimate how much
the performance would be improved by installing persistent memory.
On other tmpfs file systems such as /run, we will not use mmap().
mariadb-backup: Eliminated several variables. We will refer
directly to recv_sys and log_sys.
backup_wait_for_lsn(): Detect non-progress of
xtrabackup_copy_logfile(). In this new log format with
arbitrary-sized blocks, we can only detect log file overrun
indirectly, by observing that the scanned log sequence number
is not advancing.
xtrabackup_copy_logfile(): On PMEM, do not modify the sequence bit,
because we are not allowed to modify the server's log file, and our
memory mapping is read-only.
trx_flush_log_if_needed_low(): Do not use the callback on pmem.
Using neither flush_lock nor write_lock around PMEM writes seems
to yield the best performance. The pmem_persist() calls may
still be somewhat slower than the pwrite() and fdatasync() based
interface (PMEM mounted without -o dax).
recv_sys_t::buf: Remove. We will use log_sys.buf for parsing.
recv_sys_t::MTR_SIZE_MAX: Replaces RECV_SCAN_SIZE.
recv_sys_t::file_checkpoint: Renamed from mlog_checkpoint_lsn.
recv_sys_t, log_sys_t: Removed many data members.
recv_sys.lsn: Renamed from recv_sys.recovered_lsn.
recv_sys.offset: Renamed from recv_sys.recovered_offset.
log_sys.buf_size: Replaces srv_log_buffer_size.
recv_buf: A smart pointer that wraps log_sys.buf[recv_sys.offset]
when the buffer is being allocated from the memory heap.
recv_ring: A smart pointer that wraps a circular log_sys.buf[] that is
backed by ib_logfile0. The pointer will wrap from recv_sys.len
(log_sys.file_size) to log_sys.START_OFFSET. For the record that
wraps around, we may copy file name or record payload data to
the auxiliary buffer decrypt_buf in order to have a contiguous
block of memory. The maximum size of a record is less than
innodb_page_size bytes.
recv_sys_t::parse(): Take the smart pointer as a template parameter.
Do not temporarily add a trailing NUL byte to FILE_ records, because
we are not supposed to modify the memory-mapped log file. (It is
attached in read-write mode already during recovery.)
recv_sys_t::parse_mtr(): Wrapper for recv_sys_t::parse().
recv_sys_t::parse_pmem(): Like parse_mtr(), but if PREMATURE_EOF would be
returned on PMEM, use recv_ring to wrap around the buffer to the start.
mtr_t::finish_write(), log_close(): Do not enforce log_sys.max_buf_free
on PMEM, because it has no meaning on the mmap-based log.
log_sys.write_to_buf: Count writes to log_sys.buf. Replaces
srv_stats.log_write_requests and export_vars.innodb_log_write_requests.
Protected by log_sys.mutex. Updated consistently in log_close().
Previously, mtr_t::commit() conditionally updated the count,
which was inconsistent.
log_sys.write_to_log: Count swaps of log_sys.buf and log_sys.flush_buf,
for writing to log_sys.log (the ib_logfile0). Replaces
srv_stats.log_writes and export_vars.innodb_log_writes.
Protected by log_sys.mutex.
log_sys.waits: Count waits in append_prepare(). Replaces
srv_stats.log_waits and export_vars.innodb_log_waits.
recv_recover_page(): Do not unnecessarily acquire
log_sys.flush_order_mutex. We are inserting the blocks in arbitary
order anyway, to be adjusted in recv_sys.apply(true).
We will change the definition of flush_lock and write_lock to
avoid potential false sharing. Depending on sizeof(log_sys) and
CPU_LEVEL1_DCACHE_LINESIZE, the flush_lock and write_lock could
share a cache line with each other or with the last data members
of log_sys.
Thanks to Matthias Leich for providing https://rr-project.org traces
for various failures during the development, and to
Thirunarayanan Balathandayuthapani for his help in debugging
some of the recovery code. And thanks to the developers of the
rr debugger for a tool without which extensive changes to InnoDB
would be very challenging to get right.
Thanks to Vladislav Vaintroub for useful feedback and
to him, Axel Schwenke and Krunal Bauskar for testing the performance.
