It was assumed in
https://bugs.launchpad.net/codership-mysql/+bug/1378355 that xtrabackup
didn't have the groups-defaults-suffix because it wasn't listed in the
help output.
Also --defaults-group was always just an additional group despite the
misleading description implying it was a replacement.
So actually we can use the default* mysqld arguements to xtrabackup as
the standard mysqld configuration parser was used.
(from 10.1 to 10.0-galera)
This conflicted signficantly with 7d550c76be
which added --defaults-group-suffix support.
Took the approach of 4bb49d84a9 and adapted the
--defaults-group-suffix handling to be consistent.
The following changes as follows:
SST scripts now use $MY_PRINT_DEFAULTS rather than the lowercase for
consistency and this include all required --default arguements.
Backport/merge by Daniel Black <daniel@linux.vnet.ibm.com>
4bb49d84a9 had a single option, --mysqld to obtain
the required innodb_log_group_home_dir.
83664e21e4 enumberated the groups when --mysqld
was sufficient.
Problem:
The command was:
find $paths -mindepth 1 -regex $cpat -prune -o -exec rm -rf {} \+
Which was supposed to work as
* skipping $paths directories themselves (-mindepth 1)
* see if the dir/file name matches $cpat (-regex)
* if yes - don't dive into the directory, skip it (-prune)
* otherwise (-o)
* remove it and everything inside (-exec)
Now -exec ... \+ works like this:
every new found path is appended to the end of the command line.
when accumulated command line length reaches `getconf ARG_MAX` (~2Gb)
it's executed, and find continues, appending to a new command line.
What happens here, find appends some directory to the command line,
then dives into it, and starts appending files from that directory.
At some point command line overflows, rm -rf gets executed and removes
the whole directory. Now find tries to continue scanning the directory
that was already removed.
Fix: don't dive into directories that will be recursively removed
anyway, use -prune for them. Basically, we should be pruning both paths
that have matched $cpat and paths that have not matched it. This is
achived by pruning unconditionally, before the regex is tested:
find $paths -mindepth 1 -prune -regex $cpat -o -exec rm -rf {} \+
Patch Credit:- Serg
Problem:
The command was:
find $paths -mindepth 1 -regex $cpat -prune -o -exec rm -rf {} \+
Which was supposed to work as
* skipping $paths directories themselves (-mindepth 1)
* see if the dir/file name matches $cpat (-regex)
* if yes - don't dive into the directory, skip it (-prune)
* otherwise (-o)
* remove it and everything inside (-exec)
Now -exec ... \+ works like this:
every new found path is appended to the end of the command line.
when accumulated command line length reaches `getconf ARG_MAX` (~2Gb)
it's executed, and find continues, appending to a new command line.
What happens here, find appends some directory to the command line,
then dives into it, and starts appending files from that directory.
At some point command line overflows, rm -rf gets executed and removes
the whole directory. Now find tries to continue scanning the directory
that was already removed.
Fix: don't dive into directories that will be recursively removed
anyway, use -prune for them. Basically, we should be pruning both paths
that have matched $cpat and paths that have not matched it. This is
achived by pruning unconditionally, before the regex is tested:
find $paths -mindepth 1 -prune -regex $cpat -o -exec rm -rf {} \+
Patch Credit:- Serg
wrep_sst_common: Setting "-c ''" for my_print_defaults just takes no values from config at all. $MY_PRINT_DEFAULTS is already set at the top of the script to have --defaults-file and --defaults-extra-file. If WSREP_SST_OPT_CONF if set to "--defaults-file=/etc/my.cnf --defaults-extra-file=/etc/my.extra.cnf", then "my_print_defaults -c "" --defaults-file=/etc/my.cnf" succeeds, but if WSREP_SST_OPT_CONF is empty - no default values are taken at all.
wsrep_sst_xtrabackup-v2: innobackupex does not support --defaults-extra-file, so ${WSREP_SST_OPT_CONF} cannot be used as an argument, it has been changed to ${WSREP_SST_OPT_DEFAULT}. Removed --defaults-file= from INNOMOVE line, because WSREP_SST_OPT_CONF already includes it (INNOBACKUP was fine, INNOMOVE - not).
This commit implements aggregate stored functions. The basic idea behind
the feature is:
* Implement a special instruction FETCH GROUP NEXT ROW that will pause
the execution of the stored function. When the instruction is reached,
execution of the initial query resumes "as if" the function returned.
This gives the server the opportunity to advance to the next row in the
result set.
* Stored aggregates behave like regular aggregate functions. The
implementation of thus resides in the class Item_sum_sp. Because it is
an aggregate function, for each new row in the group, the
Item_sum_sp::add() method will be called. This is when execution resumes
and the function does another iteration to "add" one extra element to
the final result.
* When the end of group is reached, val_xxx() method will be called for
the item. This case is handled by another execute step for the stored
function, only with a special flag to force a call to the return
handler. See Item_sum_sp::execute() for details.
To allow this pause and resume semantic, we must preserve the function
context across executions. This is stored in Item_sp::sp_query_arena only for
aggregate stored functions, but has no impact for regular functions.
We also enforce aggregate functions to include the "FETCH GROUP NEXT ROW"
instruction.
Signed-off-by: Vicențiu Ciorbaru <vicentiu@mariadb.org>
- mysql_install_db now prints position to error file, if log-error is used
- Warning about compatibility now mentions MySQL 5.6 and 5.7
- Give warning if --show_compatibility_56 is used
another followup for 4c2c057d40.
there are six possible cases:
--port can be set or not.
--address can be set, not set, or set but without a port number
The correct behavior is:
1 both --port and --address have a port number
- use it if it's the same, otherwise an error
2 only --port has the number (--address isn't set)
- use the value from --port
3 only --port has the number (--address is set, but has no port)
- use the value from --port
4 --port is unset, --address has the port number
- use the value from --address
5 --port is unset, --address has no port number
- use the value from --address, that is, port is empty string
6 --port is unset, --address is unset
- port is unset (an error somewhere later)
case 5 wasn't handled correctly
- Expand paths also for jemalloc
- Test also if tcmalloc or jemalloc is in /usr/lib64
- Take into account that .so has a version
- Remove automatic adding of flavors ( _minial, _debug). Better to
have user specify these directly
- Changed documentation link to MariaDB
- Don't give extra error if mysqld_safe_helper doesn't exist
always search in compile-time specified paths
INSTALL_BINDIR, INSTALL_SBINDIR, INSTALL_MYSQLSHAREDIR. User
can set them to arbitrary values, it's not enough to search only
in their usual values of bin, sbin and libexec, share and share/mysql.
1. detect resolveip location, don' assume it's in $basedir/bin
2. don't guess $scriptdir to (incorrectly) construct the $0 path
3. rename find_in_basedir -> find_in_dirs, don't prepend $basedir
automatically. This allows to use identical path lists in
find_in_dirs and in cannot_find_file.
4. move search path lists to CMakeLists.txt to avoid specifying the
same path list twice (in find_in_dirs and in cannot_find_file).
Fix for the following error messages during SST:
/usr/local/mysql/bin/wsrep_sst_rsync: 258: /usr/local/mysql/bin/wsrep_sst_rsync: [[: not found
/usr/local/mysql/bin/wsrep_sst_rsync: 263: /usr/local/mysql/bin/wsrep_sst_rsync: [[: not found
/usr/local/mysql/bin/wsrep_sst_rsync: 268: /usr/local/mysql/bin/wsrep_sst_rsync: [[: not found
This is regression caused by patch of mdev-10767.
1st problem :- mktmp is invoked without '-t' or specifing tmp directory.
2nd problem :- Since eval_log_error redirect stderr to stdout '2>' will
return nothing. and hence $wr_logfile will be empty.
Patch Credit:- Andrii Nikitin
wsrep_sst_xtrabackup-v2: innobackupex does not support --defaults-extra-file, so ${WSREP_SST_OPT_CONF} cannot be used as an argument, it has been changed to ${WSREP_SST_OPT_DEFAULT}. Removed --defaults-file= from INNOMOVE line, because WSREP_SST_OPT_CONF already includes it (INNOBACKUP was fine, INNOMOVE - not).
Problem:- To create file in /tmp dir mysqld require permission initrc_tmp_t.
And mysqld does not have his permission.
Solution:- Instead of giving mysqld permission of initrc_tmp_t , we redirected
log to file in /tmp dir through shell. I also removed a earlier workarround
in mysqld_safe.sh , which create tmp log file in datadir.
Corrects the following error with rsync sst on FreeBSD:
WSREP_SST: [ERROR] rsync daemon port '4444' has been taken
The FreeBSD version of grep doesn't play nicely with the -w parameter mixed with [[:space:]] and ends up matching nothing. This causes the script to loop and attempt to spawn more than one instance of rsync, which fails with the initial instance already having the port open. Because of this, the entire script fails and no sst occurs resulting in the error message listed above appearing in the log file.
For running the Galera tests, the variable my_disable_leak_check
was set to true in order to avoid assertions due to memory leaks
at shutdown.
Some adjustments due to MDEV-13625 (merge InnoDB tests from MySQL 5.6)
were performed. The most notable behaviour changes from 10.0 and 10.1
are the following:
* innodb.innodb-table-online: adjustments for the DROP COLUMN
behaviour change (MDEV-11114, MDEV-13613)
* innodb.innodb-index-online-fk: the removal of a (1,NULL) record
from the result; originally removed in MySQL 5.7 in the
Oracle Bug #16244691 fix
377774689b
* innodb.create-index-debug: disabled due to MDEV-13680
(the MySQL Bug #77497 fix was not merged from 5.6 to 5.7.10)
* innodb.innodb-alter-autoinc: MariaDB 10.2 behaves like MySQL 5.6/5.7,
while MariaDB 10.0 and 10.1 assign different values when
auto_increment_increment or auto_increment_offset are used.
Also MySQL 5.6/5.7 exhibit different behaviour between
LGORITHM=INPLACE and ALGORITHM=COPY, so something needs to be tested
and fixed in both MariaDB 10.0 and 10.2.
* innodb.innodb-wl5980-alter: disabled because it would trigger an
InnoDB assertion failure (MDEV-13668 may need additional effort in 10.2)
In summary, wsrep_node_address and wsrep_sst_receive_address can now
be set to IPv6 addresses escaped by []. Rsync SST works out ouf the
box thanks to rsync daemon listening on both IPv4 and IPv6 sockets by
default. For xtrabackup SST onver IPv6 one needs to set sockopt in
the [sst] section of joiner's configuration file to ",pf=ip6" if
using socat as a streamer or to "-6" if using netcat.
This happens because on line 59 of /usr/bin/wsrep_sst_mysqldump
we have a check :
"if ! $MYSQL_CLIENT --version | grep 'Distrib 10.1' >/dev/null"
but the client is 10.2 so it doesnt match the grep expression.
Fixed check to be:
"if ! $MYSQL_CLIENT --version | grep 'Distrib 10.' >/dev/null"
so that every 10. version is accepted.
InnoDB I/O and buffer pool interfaces and the redo log format
have been changed between MariaDB 10.1 and 10.2, and the backup
code has to be adjusted accordingly.
The code has been simplified, and many memory leaks have been fixed.
Instead of the file name xtrabackup_logfile, the file name ib_logfile0
is being used for the copy of the redo log. Unnecessary InnoDB startup and
shutdown and some unnecessary threads have been removed.
Some help was provided by Vladislav Vaintroub.
Parameters have been cleaned up and aligned with those of MariaDB 10.2.
The --dbug option has been added, so that in debug builds,
--dbug=d,ib_log can be specified to enable diagnostic messages
for processing redo log entries.
By default, innodb_doublewrite=OFF, so that --prepare works faster.
If more crash-safety for --prepare is needed, double buffering
can be enabled.
The parameter innodb_log_checksums=OFF can be used to ignore redo log
checksums in --backup.
Some messages have been cleaned up.
Unless --export is specified, Mariabackup will not deal with undo log.
The InnoDB mini-transaction redo log is not only about user-level
transactions; it is actually about mini-transactions. To avoid confusion,
call it the redo log, not transaction log.
We disable any undo log processing in --prepare.
Because MariaDB 10.2 supports indexed virtual columns, the
undo log processing would need to be able to evaluate virtual column
expressions. To reduce the amount of code dependencies, we will not
process any undo log in prepare.
This means that the --export option must be disabled for now.
This also means that the following options are redundant
and have been removed:
xtrabackup --apply-log-only
innobackupex --redo-only
In addition to disabling any undo log processing, we will disable any
further changes to data pages during --prepare, including the change
buffer merge. This means that restoring incremental backups should
reliably work even when change buffering is being used on the server.
Because of this, preparing a backup will not generate any further
redo log, and the redo log file can be safely deleted. (If the
--export option is enabled in the future, it must generate redo log
when processing undo logs and buffered changes.)
In --prepare, we cannot easily know if a partial backup was used,
especially when restoring a series of incremental backups. So, we
simply warn about any missing files, and ignore the redo log for them.
FIXME: Enable the --export option.
FIXME: Improve the handling of the MLOG_INDEX_LOAD record, and write
a test that initiates a backup while an ALGORITHM=INPLACE operation
is creating indexes or rebuilding a table. An error should be detected
when preparing the backup.
FIXME: In --incremental --prepare, xtrabackup_apply_delta() should
ensure that if FSP_SIZE is modified, the file size will be adjusted
accordingly.
Currently galera has capability of using delta transfer algorithm (rsync)
for SST. But for using delta transfer we have change/copy wsrep_sst_rsync
wsrep_sst_rsync_wan. This patch creates a symbolic link of
wsrep_sst_rsync_wan to wsrep_sst_rsync.
IB: Fixes in logic when to do versioned or usual row updates. Now it is
able to do unversioned updates for versioned tables just by disabling
`TABLE_SHARE::versioned` flag.
SQL: DDL tracking for:
* RENAME TABLE, ALTER TABLE .. RENAME TO;
* DROP TABLE;
* data-modifying operations (f.ex. ALTER TABLE .. ADD/DROP COLUMN).
Backport to 5.5
Current MySQL builds, even on Pushbuild, are not reproducible; they return
different results depending on which directory they are built from (and
Pushbuild uses several different directories). This is because absolute paths
leak into debug information, and even worse, __FILE__. The latter moves code
around enough that we've actually seen sysbench changes on the order of 4% in
some tests.
CMake seemingly insists on using absolute paths, but we can insert our own
layer between CMake and GCC to relativize all paths. Also give the right flags
to get debug information reproducible and turn off build stamping. This makes
the mysqld build 100% bit-for-bit reproducible between runs on my machine,
even when run from different directories.
Also, include fixes by Vladislav Vaintroub to the
aws_key_management plugin. The AWS C++ SDK specifically depends on
OPENSSL_LIBRARIES, not generic SSL_LIBRARIES (such as YaSSL).
Intermediate commit.
Implement auto-creation of mysql.gtid_slave_pos* tables with needed engines,
if listed in --gtid-pos-auto-engines.
Uses an asynchronous approach to minimise locking overhead.
The list of available tables is extended with a flag. Extra entries are
added for --gtid-pos-auto-engines tables that do not exist yet, marked as
not existing but ready for auto-creation.
If record_gtid() needs a table marked for auto-creation, it sends a request
to the slave background thread to create the table, and continues to use an
existing table for the current and immediately coming transactions.
As soon as the slave background thread has made the new table available, it
will be used for all subsequent relevant transactions in record_gtid().
This asynchronous approach also avoids a lot of complex issues around trying
to do DDL in the middle of an on-going transaction.
FROM THE CURRENT DIRECTORY
DESCRIPTION
===========
When 'mysqlaccess' tool is run, it reads (and executes) the
content of its configuration file 'mysqlaccess.conf' from
the current directory. This is not a recommended behaviour
as someone with ill intentions can insert malicious
instructions into this file which could be executed
whenever this tool is run.
ANALYSIS
========
The configuration file is presently looked for, in the
following folders (in given order):
1. Current directory
2. SYSCONFDIR //This gets expanded
3. /etc/
Owing to the reasons mentioned above, we should not permit
the file to be in the current directory. Since the other
two folders are assumed to be accessible only to authorized
people, the config file is safe to be read from there.
FIX
===
Modified the script so that it looks for the config file
now in the following two folders (in the given order):
1. SYSCONFDIR
2. /etc/
If it's absent from above locations but present in current
directory, an error is thrown asking the user to move the
file to one of the above locations and retry.
NOTE
====
The location paths and their precedence are not documented
for this tool. It needs to be noted as part of the
associated documentation.
mysqld_safe is working on real files, however passing these file paths
as is to mysqld as options gives different meaning when paths are
relative.
mysqld_safe uses current working directory as basedir for relative paths,
while mysqld uses $datadir as basedir.
Revoked executable bit from files that are not supposed to be executed directly.
Removed interpreted from files that are not supposed to be executed directly.
Added interpreter to files that are supposed to be executed directly.
Fatal error: mysql.user table is damaged or in unsupported 3.20 format
The problem stems from MySQL 5.7.6. According to MySQL documentation:
In MySQL 5.7.6, the Password column was removed and all credentials are
stored in the authentication_string column.
If opening a MySQL 5.7.6 (and up) datadir with MariaDB 10.2, the user table
appears corrupted. In order to fix this, the server must be started with
--skip-grant-tables and then a subsequent mysql_upgrade command must be
issued.
This patch updates the mysql_upgrade command to also add the removed
Password column. The password column is necessary, otherwise
the mysql_upgrade script fails due to the Event_scheduler not being able
to start, as it can't find Event_priv in the table where it ought to be.
MySQL's version has column position 28 (0 index) vs our datadir version
expects position 29.
Fix of Bug#25088048 caused paths to be relative, not absolute, this
proved to be problematic.
Fix is to still ignore current working directory, however switch to
using full path of basedir, which is set to parent directory of bin/
directory where mysqld_safe is located.
References to legacy tool mysql_print_defaults are removed, only
my_print_defaults is used these days.
This will also fix:
Bug#11745176 (11192) MYSQLD_SAFE ONLY EVALUATES --DEFAULTS-FILE OPTION WHEN IT IS THE FIRST OP
Bug#23013510 (80866) MYSQLD_SAFE SHOULD NOT SEARCH $MY_BASEDIR_VERSION/VAR AS DATADIR
Bug#25244898 (84173) MYSQLD_SAFE --NO-DEFAULTS & SILENTLY DOES NOT WORK ANY MORE
Bug#25261472 (84219) INITSCRIPT ERRORS WHEN LAUCHING MYSQLD_SAFE IN NON DEFAULT BASEDIR
Bug#25319392 (84263) MYSQL.SERVER (MYSQL SERVER STARTUP SCRIPT) CAN NOT WORK,AND EXPORT SOME ERROR.
Bug#25319457 MYSQLD_SAFE MIGHT FAIL IF $DATADIR HAS TRAILING /
Bug#25341981 MYSQLD_SAFE ASSUMES INCORRECT BASEDIR WHEN EXECUTED WITH ABSOLUTE PATH
Bug#25356221 (84427) MYSQLD_SAFE FAILS TO START WHEN USING A FIFO FOR LOG-ERROR (REGRESSION)
Bug#25365194 (84447) MYSQLD_SAFE DOESN'T CHECK EXISTENCE OF GIVEN BASEDIR PARAMETER
Bug#25377815 ERRORS WHILE STARTING MYSQLD_SAFE WITH SYM LINK ENABLED
