diff --git a/sql/log.cc b/sql/log.cc
index c5cdc2cccc5..6fead95a4b1 100644
--- a/sql/log.cc
+++ b/sql/log.cc
@@ -2933,7 +2933,7 @@ const char *MYSQL_LOG::generate_name(const char *log_name,
 
 
 MYSQL_BIN_LOG::MYSQL_BIN_LOG(uint *sync_period)
-  :reset_master_pending(false),
+  :reset_master_pending(false), mark_xid_done_waiting(0),
    bytes_written(0), file_id(1), open_count(1),
    group_commit_queue(0), group_commit_queue_busy(FALSE),
    num_commits(0), num_group_commits(0),
@@ -3749,6 +3749,31 @@ bool MYSQL_BIN_LOG::reset_logs(THD* thd, bool create_new_log,
   const char* save_name;
   DBUG_ENTER("reset_logs");
 
+  if (!is_relay_log)
+  {
+    if (init_state && !is_empty_state())
+    {
+      my_error(ER_BINLOG_MUST_BE_EMPTY, MYF(0));
+      DBUG_RETURN(1);
+    }
+
+    /*
+      Mark that a RESET MASTER is in progress.
+      This ensures that a binlog checkpoint will not try to write binlog
+      checkpoint events, which would be useless (as we are deleting the binlog
+      anyway) and could deadlock, as we are holding LOCK_log.
+
+      Wait for any mark_xid_done() calls that might be already running to
+      complete (mark_xid_done_waiting counter to drop to zero); we need to
+      do this before we take the LOCK_log to not deadlock.
+    */
+    mysql_mutex_lock(&LOCK_xid_list);
+    reset_master_pending= true;
+    while (mark_xid_done_waiting > 0)
+      mysql_cond_wait(&COND_xid_list, &LOCK_xid_list);
+    mysql_mutex_unlock(&LOCK_xid_list);
+  }
+
   if (thd)
     ha_reset_logs(thd);
   /*
@@ -3760,24 +3785,6 @@ bool MYSQL_BIN_LOG::reset_logs(THD* thd, bool create_new_log,
 
   if (!is_relay_log)
   {
-    if (init_state && !is_empty_state())
-    {
-      my_error(ER_BINLOG_MUST_BE_EMPTY, MYF(0));
-      mysql_mutex_unlock(&LOCK_index);
-      mysql_mutex_unlock(&LOCK_log);
-      DBUG_RETURN(1);
-    }
-
-    /*
-      Mark that a RESET MASTER is in progress.
-      This ensures that a binlog checkpoint will not try to write binlog
-      checkpoint events, which would be useless (as we are deleting the binlog
-      anyway) and could deadlock, as we are holding LOCK_log.
-    */
-    mysql_mutex_lock(&LOCK_xid_list);
-    reset_master_pending= true;
-    mysql_mutex_unlock(&LOCK_xid_list);
-
     /*
       We are going to nuke all binary log files.
       Without binlog, we cannot XA recover prepared-but-not-committed
@@ -8834,9 +8841,13 @@ TC_LOG_BINLOG::mark_xid_done(ulong binlog_id, bool write_checkpoint)
     locks in the opposite order.
   */
 
+  ++mark_xid_done_waiting;
   mysql_mutex_unlock(&LOCK_xid_list);
   mysql_mutex_lock(&LOCK_log);
   mysql_mutex_lock(&LOCK_xid_list);
+  --mark_xid_done_waiting;
+  if (unlikely(reset_master_pending))
+    mysql_cond_signal(&COND_xid_list);
   /* We need to reload current_binlog_id due to release/re-take of lock. */
   current= current_binlog_id;
 
diff --git a/sql/log.h b/sql/log.h
index 45381152d97..4249246277f 100644
--- a/sql/log.h
+++ b/sql/log.h
@@ -471,6 +471,7 @@ class MYSQL_BIN_LOG: public TC_LOG, private MYSQL_LOG
     checkpoint arrives - when all have arrived, RESET MASTER will complete.
   */
   bool reset_master_pending;
+  ulong mark_xid_done_waiting;
 
   /* LOCK_log and LOCK_index are inited by init_pthread_objects() */
   mysql_mutex_t LOCK_index;